Conserved Protein Domain Family
SLFN-g3_helicase

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pfam09848: SLFN-g3_helicase (This model is not part of the current CDD release)
Schlafen group 3, DNA/RNA helicase domain
This domain is found in at the C terminus of group 3 Schlafen proteins from mammals, and represents the DNA/RNA helicase domain. Schlafen proteins are involved in the control of cell proliferation, induction of immune responses, and in the regulation of viral replication. These proteins inhibit DNA replication and promote cell death in response to DNA damage. They play a role in genome surveillance to kill cells with defective replication. This domain is also found in various uncharacterised prokaryotic proteins fused to a DNA helicase, GIY-YIG or PD-(D/E)XK catalytic domain or HsdR-N(terminal) domain, which are similar to AAA DNA helicase, Type III restriction enzyme ATPase, RecD and RuvB helicase.
Statistics
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PSSM-Id: 519101
Aligned: 36 rows
Threshold Bit Score: 256.052
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q6CR05        65 PSMYVIEGDAGTGKSVILNALFNDLqkqsmhgsANDILKGTHNYLVVNHPEMLKLYHQISRSF---------PYIKKSSL 135 Kluyveromyces l...
Q73QZ5       234 KSICFITGVPGAGKTLAGLNIAIER--------QKIDENEHAVFLSGNGPLVDVLQEALCRDDvk-----rnGIKKTDAM 300 Treponema denti...
Q6MJU2       233 KTICLVTGVPGAGKTLVGLDLATSW--------NNPVANQHAVLLSGNGPLVEILQEALAKDEanrs-kassPVKLSAAR 303 Bdellovibrio ba...
Q12HM1       237 KAICFVTGVPGAGKTLVGLNIATKH--------IDKDSELYSVFLSGNGPLVDILREALARDRvsrevatgrKMKKGTAV 308 Polaromonas sp....
Q21ED4       234 KSIVFVTGVPGAGKTLVGLNIATAH--------IDQDDELYSVFLSGNGPLVAILQEALARDKvarakqngeKIKIGAAR 305 Saccharophagus ...
WP_011808961 245 RCVCFVTGVPGAGKTLTGLNVVHDPs-------LRVEGGPSGIFLSGNGPLVKVVREALVLSQqr------aGRRRQDSA 311 Verminephrobact...
Q5FQ65       242 KVIVFVSGIPGAGKTLCGLKAAFAD----------GDDGTGATFLTGNPTLVSVLREALTRDTvs------rGQKRLLVE 305 Gluconobacter o...
WP_012040429 238 RVVVFVTGIPGAGKTLCGLNTVFR-------------SAAPAAFLTGNLPLVHVLREALARDAkg------pGMSLRAAN 298 Acidiphilium cr...
WP_011991359 238 LHLALVTGVPGAGKTLVGIQLVYENh------lEGSDLQNTAVFLSGNGPLVKVLQHAL--------------------- 290 Methanoregula b...
WP_012064100 228 RVLILATGVPGAGKTLLGLKFVYEC--------FKDDSKKQSIFLSGNGPLVDVLQHAL--------------------- 278 Alkaliphilus me...
Q6CR05       136 ERPTSVINSLN----------KTNSQCDVIIVDEAHLLAT-----------SKDAfkKFYGDNHLKDLMEL-SK--VLIV 191 Kluyveromyces l...
Q73QZ5       301 RKSKEFIQIIHhfrdd-aisvNTPPIERVTIFDEAQRAWDepnlsdfmkskKGILdfNMSEPEFLISIMNRhNGwaTIIC 379 Treponema denti...
Q6MJU2       304 AKAKSFIQNIHhfrde-glrtDAPPPEKVVIFDEAQRAWNktqttkfmktkKGVAdfDHSEPEYLIKLMDRhADwaVIIC 382 Bdellovibrio ba...
Q12HM1       309 SEVKAFIQNVHhfrddclqdmARPPVEHVAIFDEAQRAWNleqtaafmsrkKGRAdfKLSEPEFLISCLDRhQDwaVVVC 388 Polaromonas sp....
Q21ED4       306 SEVKAFIQNVHhfrddgladlNKAPAEHVVIFDEAQRAWNkqqtvdfmrmkKGQLnfDQSEPEFLISCMDRhKDwaVVIC 385 Saccharophagus ...
WP_011808961 312 HEVSTFIQNVHqflryhrehpAALPHEHVVVFDEAQRAWDre-------qmQRKQgvDRSEAAELFDVMDRlDGwaVIIA 384 Verminephrobact...
Q5FQ65       306 QRMESTIQSLTkfrdhyvgrpAECPPEHVMVIDEAQRCWKqaqav--rksaSRHVklTESEPAHLLDIMGRhDGfaAILC 383 Gluconobacter o...
WP_012040429 299 HRLDSAIQPLLgflrd-nvprAAAPHERVIVFDEAQRAWDaa-------fgQRKFqlDDSEAGLFLDIMARhEGgaAIVA 370 Acidiphilium cr...
WP_011991359 291 -KYKIFVQDVHgflkeyggetAKIPHEHIWVYDEAQRAWDae-------rvSEKRghATSEPEDFLRIAERmNSwgLMVA 362 Methanoregula b...
WP_012064100 279 -DSKVFVQPLRhyvkhygiqkREVPKEHIIVFDEAQRAWDle-------hvRKKHniDLSEPDLMIRITDRiPSwaALLG 350 Alkaliphilus me...
Q6CR05       192 VFDAKQSLRMGSYWDDERgngsnLQSFYDSLPVENRKWY-----------------------------TLKQQFRVVANK 242 Kluyveromyces l...
Q73QZ5       380 LIGGGQEINRGESAGIVGwf-ncLKKKYPDWDVYTSDKItdkeytknndfne---iiqglnvnifkdlHLAVSLRSFRSE 455 Treponema denti...
Q6MJU2       383 LVGGGQEINTGE-AGISEwl-daIHNKFPHWQVCLPSTTssadipniekfvq----afssrhhvdknlHLTASVRSFRSE 456 Bdellovibrio ba...
Q12HM1       389 LVGGGQEINTGE-AGIGEwi-qsLQRSFPEWRIHISPQLhdeeygagavmre---iadrpgvhlnehlHLAVSMRSFRAE 463 Polaromonas sp....
Q21ED4       386 LVGGGQEINKGE-AGIHGws-haIKESFPKWKIYASDQLkdseyggaatise---lrsiqgsnflpelHLQTSMRSFRSE 460 Saccharophagus ...
WP_011808961 385 LVGGGQEIFLGE-AGLEEwgravAVR--PDWRVVASPEVvsggasvsghrlftdgvpsgiefrpeplaHLSVGVRSFRAQ 461 Verminephrobact...
Q5FQ65       384 LIGHGQEINDGE-GGLACwgealLSH--PAWRVEAAPDVigtgdlthlpt--------tleagrqrflHLGVAIRSLREE 452 Gluconobacter o...
WP_012040429 371 LVGNGQEINTGE-AGLASwgealARR--PGWRIVGPEGVighpdparrlad-----aapagmeidpalHLDVSVRQVRSA 442 Acidiphilium cr...
WP_011991359 363 LIGEGQEIHLGEESGLPQwn-daLAKMQKPWIVHCPKKIagtftaak-------------klatsdvlDLSVSLRSHLAE 428 Methanoregula b...
WP_012064100 351 LIGEGQEIHNGEEAGIKQwk-eaVKKSKMKWKVICPSKIahifedvv-------------evvaidklDLNTTLRSHLSE 416 Alkaliphilus me...
Q6CR05       243 DTLDWIQAISTEGKILPFPKSVqsgQSKFDFKIWDDCGAMYTALREKNDENG--QCRMLATYDFPYR--------LDGKD 312 Kluyveromyces l...
Q73QZ5       456 KVSAFVKALLDVDREKAYNLYRn-fRNDYLICITRDLQEAKKWVKHNAKGTQ--RYGLTASSGAKRLrkygvwvqNKVDA 532 Treponema denti...
Q6MJU2       457 RVSDFMSALLDKDIDKAKALYSe-iKEKYPIKLTRSLEEAKLWLKEKSRGNE--RYGILASSGAGRLkahgldvkSRIEP 533 Bdellovibrio ba...
Q12HM1       464 HVSALVKHLLDRDADAARAMLAr-vQDRYPIVVTRSLQKAKSWLKQQARGSE--RFGMVVSSQAQRLrphaidvrSPMDP 540 Polaromonas sp....
Q21ED4       461 KVSLFVKQLLDMELAEAQQTYSq-lFQNYPITLTRNLDSARKWLKSQARGSE--RYGIVVSSQAERLrplgvhvkAPVNP 537 Saccharophagus ...
WP_011808961 462 RLAEWVDAVLLLDTEHARSLVPd--RREFPLHFTRDLEVAKAWLRARSEPGCgqRAGLIATSEDQRLrayglersSAFRL 539 Verminephrobact...
Q5FQ65       453 TAPRWVNAVLNGDVETAQRLAG---QTDLPFRLTRSLDDLRAGLRHRSRLTY--RCGLVASSKAKRLraeglgceVPHMD 527 Gluconobacter o...
WP_012040429 443 AAAAWIDAVLDGRAEMAAGIASa--AGGVPFRITRSLDAMRAALRGASRGTR--RAGLVCSAGAKRLraeglsadFPHMD 518 Acidiphilium cr...
WP_011991359 429 DVAQWISALLEGDLIHAKTLSEsvtSQGFDVYLTQDINVATNYVKERYKDQEdkRYGLLASSKAKNLptwgihneYNYTK 508 Methanoregula b...
WP_012064100 417 DVTTWANKLLRGSILEAKELSLkinLEGFNMYVTRDLDKAKRYCQKRYEGNKekRYGLLASSKAKILpeyqvdnsYDTTK 496 Alkaliphilus me...
Q6CR05       313 YFVQCgdnfrvRWDRYTPrALLPWSEREDTFEEVGSVYTIQGFDLNWAGVILGRSVGYDa----kTDSIKLKPEFYDDHA 388 Kluyveromyces l...
Q73QZ5       533 P----------SWFLNDM----DDVRSSFYLEETATEFDIQGLELDWTIVCWDANLRFNgv--efEYY-NFTGTKWNNIR 595 Treponema denti...
Q6MJU2       534 V----------NWFLNDK----KDVRSSFFMEDVATEFHVQGLELDWTCVAWDIDFILSlk--keTKFRSFAGTKWNNIK 597 Bdellovibrio ba...
Q12HM1       541 I----------HWFLDGK----HDVRSSFYLEDVATEFHVQGLELDWACVVWDADFRYGhd--gwLHR-SFVGSKWNKIN 603 Polaromonas sp....
Q21ED4       538 V----------NWFLDGK----DDVRSSYYLEDVATEFHVQGLELDWTCLVWDADFRYTae--gwNNF-SFRGNKWQKIN 600 Saccharophagus ...
WP_011808961 540 DYSFE------KWFLMPP----ADVRSSHALEVAASEFECQGLELDWVGLCWGGDLTPSasg-swEYR-KFRGSSWNQVR 607 Verminephrobact...
Q5FQ65       528 DKAVS------QWFLNRW-VPDKDIRASDALETCATEFAIQGLELDFVGLCWDGDLIRApsgdrwQPR-RFSGTKWANVS 599 Gluconobacter o...
WP_012040429 519 RQAVA------SWFLNAW----PDVRASDALEAPATQYACQGLEIDNVGLCWGGDLIRPragdgwLAR-RFRGTRWEEIR 587 Acidiphilium cr...
WP_011991359 509 NMREG------PWYTDPP----SSFNSCCAFRDVATEFSCQGLELDFPIVCWGDDFVWDg--------------IWKSPP 564 Methanoregula b...
WP_012064100 497 QLEVG------PWYNYGL----DNELSCCKMNKVATEFACQGLELDMPIVCWGEDMLW-------------QGTSWKKFE 553 Alkaliphilus me...
Q6CR05       389 GFTKKknikdvEKVKAKIIMNSINVLLTRGVKGLYIYAWD 428 Kluyveromyces lactis
Q73QZ5       596 NEDNI-----------LYLKNAYRVLLTRARQGFIIFIPT 624 Treponema denticola
Q6MJU2       598 SSTDQ-----------SYLKNKYRVLLTRARQGLVLFVPK 626 Bdellovibrio bacteriovorus
Q12HM1       604 LPHRQ-----------TFLKNAYRVLLTRARQGMVIVVPE 632 Polaromonas sp. JS666
Q21ED4       601 KSERK-----------MYQKNAYRVLLTRARQGMVIVVPE 629 Saccharophagus degradans 2-40
WP_011808961 608 SDSER-----------TYVRNRYRVLLTRARLGMVIWIPP 636 Verminephrobacter eiseniae
Q5FQ65       600 TAEAT-----------LWRLNTYRVLLTRARYETLIWVPQ 628 Gluconobacter oxydans
WP_012040429 588 HKEAA-----------SWQVNTYRVLLSRARYETVIFVPP 616 Acidiphilium cryptum
WP_011991359 565 AKRSK------AKDPHQLRVNSYRVVLTRGRDGFIVFVPP 598 Methanoregula boonei
WP_012064100 554 QGGAK------AKDPNQLRLNSYRVLLTRGRDGFIVFVPD 587 Alkaliphilus metalliredigens
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