7OKX


Conserved Protein Domain Family
EAF

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pfam09816: EAF (This model is not part of the current CDD release)
RNA polymerase II transcription elongation factor
Members of this family act as transcriptional transactivators of ELL and ELL2 elongation activities. Eaf proteins form a stable heterodimer complex with ELL proteins to facilitate the binding of RNA polymerase II to activate transcription elongation. The N-terminus of approx 120 residues is globular and highly conserved.
Statistics
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PSSM-Id: 519082
Aligned: 94 rows
Threshold Bit Score: 51.9265
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7OKX_O        16 LRLGESF--E---------KRPRASFHTIRYDFKPASIDTSCEGELQV-----------GKGDEVTITLphipgstppmt 73  human
CCE73285      57 IDISCLQdsVaa--------sDTEEYFAIRYGFVPDSMDKGQSVNLYEseneyileaksTDNN--SQKSv---------- 116
XP_002549260  10 LDISVLLqnAstidtptstSKDTSENIAIRYGFIPDSMDQSKPLKLYQkdqtcilkalsTEG---SNKPi---------- 76 
EMG49448      10 LDISVLLqnSt---------tNDDENIAIRYGFVPDSMDQSKPLKLYQkdqacvlkaatTDN---DDKPi---------- 67 
XP_001386955  10 IDLSALIetPsv-------sgNPDENVAVRYGFIPDSMDHTKPLTLYQneqecllrassTDG-----SDi---------- 67 
XP_007375883  10 IDLSALLdlPpi--------sDDNNNVAIRYGFIPDSMDQTKPIKLYQnkdecilettdGDN-----KPi---------- 66 
XP_002615966  10 IDLSVLGd-------------EDDSSLALRYGFIPDSMDQTRAMSLFQtdrvcvveaavTERPGIKSLPi---------- 66 
Q6BSZ0        10 IDLSAFLnkDhs--------yERDISLGIRYGFRPDSMDQTSPLTLYQtdqesliqaktVDGS--GDNMi---------- 69  Debaryomyces ha...
XP_001483043  10 LDLSILTqdVad-----------vSSVGLRYQFVPPTVDRNQPVKAYElgrecilevpsTD----IQKSi---------- 64 
XP_002490277  14 LDISSLLc-------------DDSVNLGVRYNFKPDSIDMDYPLELVQessnyilkaesDPNV--RKEPl---------- 68 
7OKX_O        74 vFKGNKRPY------------------Q-KDCVLII---NHDTg-eYVLEKLSSSIQVKKTRAE 114 human
CCE73285     117 lFEGNIQRYqpk------------nrgPgDNYILTM---SLDGk-rMALKKLDSMIRMNKTRNA 164
XP_002549260  77 fFEGIPQRYhrnstnsssstpntnnggNnDSFYLTFn-kELNGn-vVHLKKLESTIRFNKSRNI 138
EMG49448      68 yFEGIPHRYknnts---------inttNnDAYYLTF---DHNAdkiIQLKKLDSTIRFNKSRNV 119
XP_001386955  68 vFEGIPQRHkpst-----------snvAnDSFYFSYvpkKGDSs-sVQLKRLSTSIRFNKSRNV 119
XP_007375883  67 lFEGVPQRHks--------------gtAnDSYYLSY---IPERpnaVELKKLGTTIRFNKSRNV 113
XP_002615966  67 iFEGQPQRQrpa-------------snGaDSFYLTV-----SDg-rAQLRRLSNTVRVNKSRNA 111
Q6BSZ0        70 iFEGNPKRLgps------------knpAnETYFLTV---SPTGdnqIVLKKLDNTIRVSKSRNV 118 Debaryomyces hansenii
XP_001483043  65 lFEGTVLKThpea-----------hnvGaQTYFLSY----SEGk-pVQLNRLGRTLKVSKTRNA 112
XP_002490277  69 vFEGTLGKT------------------NqHDYLLIY---DDITk-rFQMDRFNGVLRMNKSRAP 110
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