Conserved Protein Domain Family
AD

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pfam09793: AD 
Anticodon-binding domain
This domain of approximately 100 residues is conserved from plants to humans. It is frequently found in association with Lsm domain-containing proteins. It is an anticodon-binding domain of a prolyl-tRNA synthetase, whose PDB structure is available under the identifier 1h4q.
Statistics
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PSSM-Id: 401665
View PSSM: pfam09793
Aligned: 94 rows
Threshold Bit Score: 41.8048
Threshold Setting Gi: 124474462
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_001382509  72 FPKKAEDLET-HLQECIANFKpnqdllankENEPSH--H-SRASPIAIKLYEKFVKLYgpeNIQWSGSDnIVIFKe-IKL 146 Scheffersomyces...
A0C782        65 qtIDIQDPKQ-TLSNLLAIDL---------AAMAQEmiK-KEMKEPHQQLFDHLQKLYr--DVDWKDQE-IIIPSisIRI 130 Paramecium tetr...
CAY69553      88 EQLKVPKHKElRYKHNYELNR---------TLKPRI----GHVSKEGLEIFKELYNLLpkgDVSWKKDD-IVIYDdsVRI 153 Komagataella ph...
Q21541        91 NPVNGTRTTE-RLDKTLGELT---------PNLMKS----PAISIRGQQAYLQLKRTIp--DTCWCGED-IRVLGl-VLV 152 Caenorhabditis ...
XP_003110945  91 NPVNGAKTAE-RLQKTLGDLR---------PNLMKS----SNVSIKGQQAYIQLKRTIa--ETYWSGED-IRVLGl-VLV 152 Caenorhabditis ...
XP_002642286  91 NPLTGNKTTD-RLVKTLGEMR---------PSVMKS-----NVPINGQQAYLQLKLTIa--DTHWAGEN-IRVMGh-VLV 151 Caenorhabditis ...
XP_011277190  70 NELDPKKIPS-VIKRNTEAVE---------LKKLTQ--N-DKATKEGQHIFNTLYKTMp--TVRWKDNS-IIILDe-VKI 132 Wickerhamomyces...
EEQ39513      84 TKVDINQFQS-HLNKLIDKSKqmlpsaeitTEETKApnKePEISPLARKLFSKLTEKLgpeNVQWHGNEsMLLFKe-IIV 161 Clavispora lusi...
XP_004194759  81 ANIDIKRLEK-DINHSIEEFR---------KDRLIH--N-PKTNDVGAKVFEKLLYVYnidSVKWDESD-IVLLDe-VKI 145 Pichia farinosa...
Q6BX41        85 ARVPINEIEA-NLNDSIKNYK---------NSLLIN--N-PKASPIAIKIFEKFFKLYgidNVKWQGSD-IILFDe-IRL 149 Debaryomyces ha...
XP_001382509 147 SKPYTLGKSGNIh-----KLKDNCKHLDEVQ 172 Scheffersomyces stipitis CBS 6054
A0C782       131 SPPYKSDNI----------SGDNKLGVERLR 151 Paramecium tetraurelia
CAY69553     154 TSPYKTDNVVSA-------HSGDDSQLEFIK 177 Komagataella phaffii GS115
Q21541       153 HKPYEVSDVTKDakatgfDESRAESAVLQVQ 183 Caenorhabditis elegans
XP_003110945 153 QKPYDVDNVTKDakatgfDETRANNALLQVK 183 Caenorhabditis remanei
XP_002642286 152 KKPYNVDSVTKDttapgyEESRANTALLQVK 182 Caenorhabditis briggsae
XP_011277190 133 NPPYQLQEVKSI---------INDQDPEESD 154 Wickerhamomyces ciferrii
EEQ39513     162 SKPYALNKI---------SHSKRSQSSKHIN 183 Clavispora lusitaniae ATCC 42720
XP_004194759 146 AKPYKLQNIt--------KLNDKTKATTQVE 168 Pichia farinosa CBS 7064
Q6BX41       150 AKPYTLGKSGNIv-----KLDENSKAMNMVE 175 Debaryomyces hansenii
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