Conserved Protein Domain Family
Atx10homo_assoc

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pfam09759: Atx10homo_assoc (This model is not part of the current CDD release)
Spinocerebellar ataxia type 10 protein domain
This is the conserved C-terminal 100 residues of Ataxin-10. Ataxin-10 belongs to the family of armadillo repeat proteins and in solution it tends to form homotrimeric complexes, which associate via a tip-to-tip association in a horseshoe-shaped contact with the concave sides of the molecules facing each other. This domain may represent the homo-association site since that is located near the C-terminus of Ataxin-10. The protein does not contain a signal sequence for secretion or any subcellular compartment confirming its cytoplasmic localisation, specifically to the olivocerebellar region.
Statistics
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PSSM-Id: 519042
Aligned: 77 rows
Threshold Bit Score: 105.653
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_009160378  817 LKKLIVLVLSSLVWKSRTVQDQIRQYGG-VETILSCTQYDACNPYIKEHAVMCLKFLLEDNRENQALVSSLEAREV-Rte 894 
XP_005844246   38 FRTDLLAAVANATYGRPAVQSEVCALGG-VELVLAQCQLDRHSPLAREWALWGVRNLCEGNAQAQEAIRQLQLCTT-V-- 113 
XP_003062424  541 YRVDALAPLANAMFNRPGVCDQVVKLGG-VPIILAATRGEDGEDFLREWALWATRNLCHGSEDARKEIESMQPEAA-A-- 616 
XP_002501343  540 YRVDCVAPLANAMFARPLVCNQVAKLGG-VAIVLAATRGEDGDDYLREWALWGVRNLCAGSDVARGEIERMQPQAA-A-- 615 
Q57UY3        197 FRREHVRLVANLTYENKEVCSAVLGDTRlLTAILGATRIDLENPGMGEWATFVIRNLCYCSNEAREILRGLTPISIvE-- 274  Trypanosoma b...
Q4CUL6        198 YRTEHMRLMANLTLDNVEACSFIVSNSAlLAAVLTSTRFDEENPGMVEWAEFCIRNLCCCTKEAHEKIRRLMPVGIsD-- 275  Trypanosoma c...
Q4QH91        199 FKTECMRLIANLTHNNVDVNAALVERDTfLFNILSATQIDEENPGMVEWAEFALRNICESSAAAREKIRKLAPQGVtD-- 276  Leishmania major
XP_002678526  391 YKTLLIRTIANLTFKSREIQDFVREQEG-LPLCLSCCGVQEQHPYLREWGVFCVRNLCEDNEENQKFIKDMNLEGIdAq- 468 
CBN74448      518 RKVELLKVIGNACFRCRRSQDLVREEGG-LPLVLNHCKVDEANPLLREYALLALRNLCEGNAANQASISSLQPQGct--- 593 
XP_002904929  366 YRSGLIRVIGNLSFRHTDHQDLVRNEGY-LPLFLNHCNIDETNPMIREWSLVALRNLCEGNEANQSYINALRPQGMdAa- 443 
XP_009160378  895 paLREKLDNM-GIKVELGPD-GKPKLS 919 
XP_005844246  114 --DNEELKRM-GVRMELDEHsGKLRVI 137 
XP_003062424  617 --DSQELAAM-GLNVSVDPAtGKVRVK 640 
XP_002501343  616 --DSQQLAAM-GLNVEVDPGtGRVRVG 639 
Q57UY3        275 --EADELFGK-AVDPHATPE-GRSAME 297  Trypanosoma brucei
Q4CUL6        276 --ESKELLSSgRVDCHLNSE-GKLVLS 299  Trypanosoma cruzi
Q4QH91        277 --QSREILAG-RCSYSFSST-GKVQLH 299  Leishmania major
XP_002678526  469 --SEEILAKQ-GFKANV-QN-GKINLE 490 
CBN74448      594 pgMEEALADM-GLEGSVNAE-GKFAVG 618 
XP_002904929  444 --STTTLDKA-KMRADIGKD-GNVKLT 466 
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