3QHQ


Conserved Protein Domain Family
Cas_Csn2

?
pfam09711: Cas_Csn2 (This model is not part of the current CDD release)
CRISPR-associated protein (Cas_Csn2)
CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins found only in CRISPR-containing species, near other CRISPR-associated proteins (cas). The species range so far for these proteins is pathogenic bacteria only. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats).
Statistics
?
PSSM-Id: 519006
Aligned: 5 rows
Threshold Bit Score: 196.155
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
3QHQ_A        38 QYDVDEHLKLFDDKQKSLKATELM-LVTDILGYDVNSAPILKLIHGDLENQFNEKPEVKSMVEKLAATITELIAFECLEN 116 Streptococcus a...
Q8E039        38 QYDVDEHLKLFDDKQKSLKATELM-LVTDILGYDVNSAPILKLIHGDLENQFNEKPEVKSMVEKLAATITELIAFECLEN 116 Streptococcus a...
Q8DTE6         7 QYDEDSELKFFNRKFKSLKPSELM-LVTDILGYDVNAPSLLKLVHADLENQFNEKPEVKSMVEKLANTITELIAYECLEN 85  Streptococcus m...
Q73QW3        40 QYSGNEGKFILSEDDKELSIPKTCeLILNPINLDINNKQNLNKIYSILKQSISDEYNYLKTCT-IKSEILKHIDDVLLSL 118 Treponema denti...
WP_022424886  40 LYDKNKSTELLVIDGEKNITTNIL-LITDLYKIDFNDKNLLKEIYSQISKSITSDEEKCMRYQELVDDLSAILENELEDY 118 Catenibacterium...
3QHQ_A       117 ELDLEYD-EITILELIKALGVKIETQSDT-IFEKCFEIIQVYHYLTKKNLLVFVNSGAYLTKDEVIKLCEYINLMQKSVL 194 Streptococcus a...
Q8E039       117 ELDLEYD-EIKILELIKALGVKIETQSDT-IFEKCFEIIQVYHYLTKKNLLVFVNSGAYLTKDEVIKLCEYINLMQKSVL 194 Streptococcus a...
Q8DTE6        86 ELDLEYD-EITILELIKALGVKIETQSDT-IFEKMFEVLQVYKYLNKKKLLVFINTLSYFKREEIAQILEYIHLSDMVVL 163 Streptococcus m...
Q73QW3       119 DIPLKRSeELDLISIFKAVNISFETEYTN-LLEKIIDYISASVELNQIKCFIFINLKQFLHFKDLSELYKFACYIKTNLF 197 Treponema denti...
WP_022424886 119 NLEFDYKnDLTIENYLKAVSLKISRKAEEkLYDRLMNYVELVTELVKKPVLVLYNCFDYLDDEELMELIKYKNYKHLHLL 198 Catenibacterium...
3QHQ_A       195 FLEPRRLY----DLPQYVIDKDY 213 Streptococcus agalactiae ATCC 13813
Q8E039       195 FLEPRRLY----DLPQYVIDKDY 213 Streptococcus agalactiae serogroup V
Q8DTE6       164 FLEPRKID----GFAQYILDEDY 182 Streptococcus mutans
Q73QW3       198 LIEGSYTStkedCEKSYIIDKDL 220 Treponema denticola
WP_022424886 199 FIENKNREvdsiAFRKYIIDEDL 221 Catenibacterium sp. CAG:290
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap