5VVL


Conserved Protein Domain Family
Cas_Cas2CT1978

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pfam09707: Cas_Cas2CT1978 
CRISPR-associated protein (Cas_Cas2CT1978)
This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.
Statistics
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PSSM-Id: 490562
Aligned: 62 rows
Threshold Bit Score: 85.6529
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5VVL_E             3 MLVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQIAGL-------AEEGNVVMAWATNT-ETGFEFQTFG 74  Escherichia...
WP_013157708       1 MVVIILEKVPKTLRGELSRWMLEVGTGVFVGSVSALVRDLLWEKCVAK-------KTAGRCCLLYRTNN-EQGFAVRTHG 72  Allomeiothe...
WP_013703775       1 MVVMILEKVPRSLRGELTRWLVEVDTGVFVGRVSAMVRDLLWEKVVEK-------AGEGRCAMAYRTNN-EQGFALKLHG 72  Marinitherm...
WP_013178777       1 MVVMVLEKVPKSLRGELTRWMLEVSTGVFVGSMSAMVRDLLWDKCVEK-------SRAGRCCQLYRTNN-EQGYAIRMHG 72  Truepera ra...
WP_012875839       1 MTVIVVEKVPASVRGELTRWLLEPRTGVFVGRPSALVRDKLWELVCQRivertgpEEMGGAVMIYTSDN-EQGFEMRIFG 79  Thermobacul...
jgi:PCC7424_2445   1 MVVFVVENVANSLRGELSRWLFEVKAGVFTGKVSALVRDELWQYIADK-------VGTGSALMIYSTNN-EQGFSAKVIG 72 
Q0W581             4 fSVFIVESVSPSLRGELTRWMIEPKAGVFIGKLSGMVRNKLWGKIIKN-------IKKGGCTMAYSYNN-EQGYKIESYG 75  uncultured ...
jgi:Sthe_3431      1 MVVMILERVPRSLRGELTRWMLEPKAGVFVGTMSALVRDKLWEKACAS-------MKGGAGMLIYSSNT-EQGFVVRFWG 72 
WP_004074390       1 MTVIICNDTPPAIRGMLKRWFVEPKPNVFVGTVNRRTREKTIEYIRRN-------AP-GLGMLILATAQnSQGFSIVSYG 72  Desulfobact...
WP_015949650       1 MLVAVANHLPPAVRGRMKLWFVEPRPNVFVSGVKDSVADGVVKYLLDH-------CPPESGLILFQRSNkPPGYKIRGLG 73  Desulfatiba...
5VVL_E            75 LNRRTPVDLDGLRL 88  Escherichia coli K-12
WP_013157708      73 DTTRTLVDFDGLTL 86  Allomeiothermus silvanus
WP_013703775      73 YQDRSLRDFDGIVL 86  Marinithermus hydrothermalis
WP_013178777      73 DSNRSIRDFDGLML 86  Truepera radiovictrix
WP_012875839      80 DTSRDLVDFEGLWL 93  Thermobaculum terrenum
jgi:PCC7424_2445  73 NRTRTLEDIEGLLL 86 
Q0W581            76 DTTRTIVDFEGLSL 89  uncultured methanogenic archaeon
jgi:Sthe_3431     73 NLGREVVDFDGLTL 86 
WP_004074390      73 ETNRIPVIYDGHYL 86  Desulfobacter postgatei
WP_015949650      74 DHTRALVEISGLQL 87  Desulfatibacillum aliphaticivorans
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