Conserved Protein Domain Family
TrbC_Ftype

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pfam09673: TrbC_Ftype 
Type-F conjugative transfer system pilin assembly protein
This entry represents TrbC, a protein that is an essential component of the F-type conjugative pilus assembly system for the transfer of plasmid DNA. The N-terminal portion of these proteins is heterogeneous.
Statistics
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PSSM-Id: 401564
View PSSM: pfam09673
Aligned: 34 rows
Threshold Bit Score: 93.8801
Threshold Setting Gi: 512380090
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:Ppro_3771         178 VFISSSMPMETIRNYAVSAGQYNDpkkvVLVMRGF-IGGmqKIGPTTSFVADVLKRsatcnlaageqcDMVNTNVLIDPI 256 Peloba...
jgi:Q7C_526            74 IFASSSLGDSSLKQLFKEASATGA----IVLFRGI-PEGk-TLGAAIRDWHTLMVG------------LDPVPQVRIDPK 135 Methyl...
Q47CP2                122 IFVSLSMPRATLQGLVNQAARAKA----AIVIRGF-ANG--SLRATVTQVQGLIGK--------------QQVAIQIDPL 180 Dechlo...
jgi:Ajs_1529          120 VFVSLAMPRPTLQRLIDQAARARA----SVILRGL-ANG--SLRQTVAQVQPLIGQ--------------RQVAVQIDPQ 178 Acidov...
WP_013292913           88 VFVSFSMPRENLLRIVEQSERTGA----RLIFRGF-TGD--KLTDMSKRIADLLGS--------------HRVEAVVHPP 146 Gallio...
Q5NX40                124 LFVSFSMPPDVIREYSRQAQAAGA----TLVLRGNyKGG--TVRRTTEQAGALNAG---------------GAGWIINPE 182 Aromat...
jgi:Mpe_B0350          92 VFVSLSMPKEVLTELSRQAKEMGA----MLVLRGF-KDG--SVDKTRIAAQEVNPS---------------GAPWEIHPD 149 Methyl...
calssnu:BYI23_E002920  89 IFVSFSMPKEVLTELARQARASGA----VMVVRGF-KDG--SLMETKRAALAVNRA---------------GAPWEIHPE 146 Burkho...
WP_012732824          132 AFASFSMPDASLVRLIKTMHIAGG----TVVFRGF-KDD--SLKATAAEMQRLGVA---------------SGGIVVNPK 189 Burkho...
CBW77305              135 IFASFTMPRESLKRLVSQANRVGA----SVVLYGF-KNN--SFKDTVQAINALDEP---------------AGNVVVNPN 192 Parabu...
jgi:Ppro_3771         257 LFRRYGIREVPATVYAKGVKVNLPeqseGNDDVVVGS--FAVAY----------GDASLEYNLSKI 310 Pelobacter propionic...
jgi:Q7C_526           136 AFVHWRVTSVPAIFRIE-----------DDKVTASALgvYSKDWlqrqietgntGSLGQRGPIHSi 190 Methylophaga frappieri
Q47CP2                181 AFDRFAISKVPSFVLVRDGTRPVAc--aSGSCAPADS--FLRST----------GDVSLDYALEHM 232 Dechloromonas aromat...
jgi:Ajs_1529          179 AFDRFAIARVPSFVLVRDGTRPESc--aAGSCAPPEA--FLRTA----------GDVSMDYALEHM 230 Acidovorax sp. JS42
WP_013292913          147 AFTQFKVNQVPALVISQSDAGNQL----DNGCAQAER--YVKVT----------GDVSQDYALDYI 196 Gallionella capsifer...
Q5NX40                183 VFTGYKIDAVPALVLSRDNLNVD-----DEGCFPVGE--YASVF----------GDISIIGSLEKI 231 Aromatoleum aromatic...
jgi:Mpe_B0350         150 LFKAFKVNKVPTIVLANAASGSLD----EEGCAPEAT--YGSVS----------GNVSLELALNTL 199 Methylibium petrolei...
calssnu:BYI23_E002920 147 LFKAFKVKTVPTFVVANAEAESVL----DDGCSPEAS--YSSVS----------GDISVDVALDTI 196 Burkholderia sp. YI23
WP_012732824          190 AFTQYRVSRVPAFVVTQGGDAGNQv--dSSGCALPQT--FVSVS----------GDVTPGYALRQI 241 Burkholderia glumae
CBW77305              193 AFNKYKIKVVPTIVLAEAATLDSVd---NEGRALHDQ--FAAVA----------GDVSLDYALDEI 243 Paraburkholderia rhi...
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