Conserved Protein Domain Family
Phage_pRha

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pfam09669: Phage_pRha (This model is not part of the current CDD release)
Phage regulatory protein Rha (Phage_pRha)
Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that Rha is a phage regulatory protein.
Statistics
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PSSM-Id: 518991
Aligned: 78 rows
Threshold Bit Score: 57.6535
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011476488  75 LDSRLLAKGLKMEHYNLLKMIRKSinyleRMQKDfntINttpvkidgcknpystelyfiEDKYINPSTtQEIPFYHVTIK 154 Ligilactobacill...
WP_021934559  19 TLSNIIAEGVGIKHSSITRTIRKHekdfeEFGKLgfkIR----------------------PSD---SgQGEKIYKLNED 73  Peptostreptococ...
Q9CEA0        19 TNHVVIAEYAGIERKSVRRLINNHkndfeNFGRLrfeIT--------------------TLPDS---RgQKVKIYQLNRN 75  Lactococcus lac...
Q82ZU6        18 TTDEVIAKYSQIKRESVSKLIKKYqkdleEFGKVgfeIR----------------------AME---SgQKAKFYQLNEE 72  Enterococcus fa...
WP_015912122  14 TLSSIIAECAGISHHAIQEHIRKHksrleHFGIIafeMR----------------------PLP---SgQRTKEYLLNEQ 68  Streptococcus u...
WP_025371787  16 TTSMAIALGTSNDHASVIKLVREYkldleEFGLLdfkSE--------------------------SSGgRPTEYAVLNEQ 69  Advenella mimig...
WP_015772538  19 VSSEQIAEGSGVQHKNVLELAATHmaslqRFGTVafeTR----------------------PLP--GGgNPVRIALLNEQ 74  Jonesia denitri...
WP_014402456  16 vGSMDIASSLGIQHKNVLELLRRYrddfaQFGRVafeTR----------------------PFETPGGsQSREVAMLSED 73  Frateuria aurantia
WP_015613503  17 TTSKIISEYGGQQHRAVRQLIETYikdlkKVGRVtfqMI----------------------PLETNGGvQNIKIYKLNEQ 74  Clostridium pas...
7_pfamImport   1 TDSTIIAEGAGVEHKAVIQLIKNHyndvsEFGKVafqMI----------------------PSPNSTTgRKIKVYRLNEQ 58 
WP_011476488 155 GCELV-AHKMTGYKGTKFTVMYINEFHKLSE 184 Ligilactobacillus salivarius
WP_021934559  74 QAILLiTYLKNTDIVRAFKKALVREFRRLKE 104 Peptostreptococcus anaerobius
Q9CEA0        76 QAMLMiTYLDNTEVVRNFKIALVKRFDEMEK 106 Lactococcus lactis subsp. lactis
Q82ZU6        73 QATLLiTYLDNTEPVRRFKKALVRQFYDMKN 103 Enterococcus faecalis
WP_015912122  69 QATLLiTFLKNTDQVANFKENLVKAFFEMRE 99  Streptococcus uberis
WP_025371787  70 QATLLiTYMRNSEIVRTFKKRLVKAFYELRS 100 Advenella mimigardefordensis
WP_015772538  75 QATLLmTFMRNTEQVVAFKVALVDAFYQMAK 105 Jonesia denitrificans
WP_014402456  74 QCYLLlTYSRNTVRVRSLKVALVRAFGSARr 104 Frateuria aurantia
WP_015613503  75 QSTFLiTLMKNTEKVVEFKFNLVKQFFEMRE 105 Clostridium pasteurianum
7_pfamImport  59 QATFViLLMKNTKSVVTFKKELIKQFHFI-- 87 
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