Conserved Protein Domain Family
DUF2397

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pfam09660: DUF2397 (This model is not part of the current CDD release)
Protein of unknown function (DUF2397)
Proteins in this entry are encoded within a conserved gene four-gene neighbourhood found sporadically in a phylogenetically broad range of bacteria including: Nocardia farcinica, Symbiobacterium thermophilum, and Streptomyces avermitilis (Actinobacteria), Geobacillus kaustophilus (Firmicutes), Azoarcus sp. EbN1 and Ralstonia solanacearum (Betaproteobacteria).
Statistics
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PSSM-Id: 518988
Aligned: 53 rows
Threshold Bit Score: 186.32
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012784736   13 FAYLGTPNAPLYTGILDVFALAKQRFTVHLRPEDVLADwpgarAGDRADAVRPAAEHLVQALDRLVEWGNLRSDADTGRV 92  Catenulispora ...
jgi:Bcoa_2037   7 ASYLTADSAAQYRVILRFFYRQHERMRDFIAPEEVLEY-----LRSLPAFQDYAEEQLHQQLAQLVKWNNLVARQDMTNA 81 
MA:Aflv_0267   19 AKYLVVDNAYRYRAILRYFYTQHERMRQYLFPEEVYAF-----LKQFDEFQDYTEEELQQDLEQLVKWKNLIARQETGHI 93 
Q5L378         12 TKYLSTENAHRYRAILRYFYIQHERMRQYLFPEEVYAF-----LKQHEEFADYTEEELQQDLDQLVKWNNLIARQETSHV 86  Geobacillus ka...
5_pfamImport    1 TSYLSVPNAPVYRKIMRCFYREYEKMHFQIYKEDIFQL-----LKQDETFTGYTMEQLMTDLEALVKWKNLTPIQDPGRV 75 
WP_013485164   14 TSYLNTDNTAHYRAIMRVFYDESEKTHYQLDKETVLEK-----LHQIPAFADYTMEQLLPHLNQLVIWKNLTPIQDPSRA 88  Ethanoligenens...
CDD28320       14 TRYLSADSYVSYRAIMRTFYLEYQKMRYQLDKDALLAL-----LQQDPLFAGYTAEQLIPDLDQLVKWKNLTPIQDPHKA 88 
WP_014354596   16 MRYLTVENAWRYRSILRYFYIQYEKMNYWLYKEEVYEV-----LKENQEFKEYTMDMCKQDLDMLLSWKNLSAIQDAAKV 90  Acetobacterium...
CDE45542       14 TAYLTAENVTRYRAILRFFYLQHERIRYWLDQDEVYEE-----MKKYEEFAEYTPEQCRQDLNALENWKNLIAMQDTKKI 88 
CDA25296       14 AKYLNADNVSRYRCIMRIFFENYEKLRYWLYQEEVYAQ-----MVQDPFFADYKPEQCQQDLTMLVEWKNLNTIQDTKKV 88 
WP_012784736   93 TTVEDFNRARRIYQLTRHGQAALAAIEHYEQTLGQ-RGRLQTVALADIAEQLSALAVHAEAAEaPDQa-TVGLLLFALTE 170 Catenulispora ...
jgi:Bcoa_2037  82 KTIEEYKKKRFRYQCTPYTVEIERMLIQLEKLGDQfQGSLERSQFDRLLASLEKLEEELEHPL-NKPaaDYMHIWDDIFH 160
MA:Aflv_0267   94 RTIEEFKKKRFRYQCSPYTVEIERMIRTLEQLGDTfGGSLEKTRFDRLYASLVRMEAIIHAGF-VEKreEMNQVWEETFD 172
Q5L378         87 RTIEEFKKKRFRYQCSPYTVEIERMIRTLEQLGDSfGGSLEKTRFDRLYASLSRIEAIIASGF-QEQrdEMYQVWEETFD 165 Geobacillus ka...
5_pfamImport   76 YTIADYKNKQYRYTMSEYAVEIERLTVRLENLFLE-SGNLSTNFFVRLEKSLQKAEEIKDSSL-K----EINEWWGLLQE 149
WP_013485164   89 NTIAEYKNNQFRYLMSGAAVEVERMTIRLEALVLE-SASLSIYLFPRIQNALMEMESLQAAPL-K----DVDEWWQNLQE 162 Ethanoligenens...
CDD28320       89 YTIADFKNRQFQYMMTEAALEVERMTITLENLYTH-STGLSSSAFRRIQGALRAAEQLEKMSL-K----EVGEWWGELQE 162
WP_014354596   91 STVEEFKNKQFRYQLSEYSVEIERLTLRLENLFVE-SASLEPTLLERLREELKKLPQVAKQSE-K----EVGSWWSSLNS 164 Acetobacterium...
CDE45542       89 TSVEAFKNRKYRYQLSEYAVEIERMTIRLENLSVE-GASLEPSLLERIKEQIFDMITIAGETP-A----KVYAWWDNLQN 162
CDA25296       89 SSIEEFKNKKFRYQMSEYSVEIERLVLRLENLFIE-GASLEPTLLERIRINIARFPQMAEEDI-N----KVYTWWNDLNN 162
WP_012784736  171 RFTGLADNAEAFMSSLRRTVDFSDGDGdeEAFLAYKDRLIEYIDKFIADLANRGAQIAGLIERIETAGIARILDAAACRE 250 Catenulispora ...
jgi:Bcoa_2037 161 FFGTIRTNTADYIAYINSEKTSQRMQT--EAFLVYKNQFTAYLRDFIVSLQKTSLQIRGRLRELDGQRLAPFFEKLVEHR 238
MA:Aflv_0267  173 YFRKIIQNSADYIAYLNGENMEERMMS--DSFLVYKEQFTAYLRDFIVALQKTSMQIEKLLEDLPADGVRRFIEEVVAYQ 250
Q5L378        166 YFKKIIQNSADYMAYLHSENVEERMTS--ESFLVYKEQFTAYLRDFIVALQKTSMQIEQLLENLPEDGVRQFIGHVVDYE 243 Geobacillus ka...
5_pfamImport  150 DFKRLNQNYQDYLRDFYSGKTEQLMKS--VEFVVHKDKFIKYLNEFVQELQRHSKRIEQILSDNMLVIEEYILSKVIQSE 227
WP_013485164  163 DFKRLNQNYQDYLRDFYSSKAEHMMRS--AEFIAHKEHVVKYLRDFVQELQSRGGKIEKVLFEIPDTLINTILDKIVKSE 240 Ethanoligenens...
CDD28320      163 DFRRLRQNHQDYLREFYGPSAEKQMKS--AEFLVYKQHLIRYLEDFVQDLQSSAAQIGALLESFSEEQVHRILTLVHKSA 240
WP_014354596  165 DFKRLNQNYQDYIRDLYSIKAEEMMKT--QEFMVFKDKFIEYLRDFVKGLQNHANAIEYSLKNLSLADIDQVLKKAIAYE 242 Acetobacterium...
CDE45542      163 DFKRLNQNYQDYMKSLNSARAEELMKS--TEFLIYKDNLIEYLRSFVKGLHIHAGAIESRLKNTNTSVFEEILDKIVSYE 240
CDA25296      163 DFVRLNQNYQDYIRDLNSVKAEEMMHT--KEFLVFKDRLVEYLRNFIKGLQRNVGVIEEDLRTLEAGNKQQVFEKIVQYE 240
WP_012784736  251 AVDALPDVDRadvadapdvytaaVQAVTRDWENRWRGLREWFVSSGSRRPsQARLLRNAAVSGITNLVNTVAALNERRGG 330 Catenulispora ...
jgi:Bcoa_2037 239 RQIPRLEDTAa-----------sEQEWLEEFHEYWGSLRRWFLGGSSSQS-ELEMLQMQTNEMIRRMARYVQRISERQQH 306
MA:Aflv_0267  251 LAIPRFEGAVl-----------sREQLTEEKLDTWRSLKEWFLGRNGHES-ELSFLQKQTNEAIRRMTRVVQRLGERHHH 318
Q5L378        244 RSIPRFADAPp-----------pRPMQIEEKWETWRSLCEWFLGRNGRES-ELLFLQYQTNEAIRRLTRVVQRLGERHHH 311 Geobacillus ka...
5_pfamImport  228 LDIPHAVLQLhg---------naEPSIRENVMGKWNSLKNWFIDSQGNEC-ECKKVLKITNDVIRSIIQNAALIVQLQNG 297
WP_013485164  241 LDKPRPSSERpp---------nfKVQIKENIRGKWRSLYEWFVSEAGRLS-ESQYVLETTNEVIRKIIQNANFIIQMQNN 310 Ethanoligenens...
CDD28320      241 LEVPRPHGDPgp---------fwQQELWQQEQGVWNSLMEWFT---GKDS-TARQVMDVTNEVIRRVVQNAAILVQMQNM 307
WP_014354596  243 VSIPRIETEId------------EAGISENIYGRWDSLNAWFLGAKGNES-EATRLMDITNDIIRKITRYASQISESRNS 309 Acetobacterium...
CDE45542      241 MSIPRVDVIPd------------QKLITENEKGRLNSLLDWFVPRNGRES-EATRLFDMTNESIRKITRFATRISEQFYM 307
CDA25296      241 LLIPRMDVEVs------------RELLEEKTKGRFQSIYDWFVSSNGEEN-EAGKLFDATNEIIRRITRYAAQLSEKNAF 307
WP_012784736  331 RSDRSADLRALARFFAQAPDDAAAHRLWRAAFALSPARHLTvdADtedaWEQAEYPPGTPWAAAASLQISPRLRETGSYE 410 Catenulispora ...
jgi:Bcoa_2037 307 FRSRKKDYLHLAKWFAECRNLEEAHQLSSIVFGAMTVRHLH--LE-----EATTDNLHAETWEEQPEMRQIKPRTNRYRE 379
MA:Aflv_0267  319 FRSRKKDYLHLAKWFSSLETVEEAHKLSAVVFGCFHTKHI---VA----ENDATENMYRDIWEEQPTEWLVKPRVRHYRE 391
Q5L378        312 FRSRKGDYLHLARWFSRLESIEEAHCLSAVVFGCFHTKHL---VA----DTEATDNIYRDVWDEPPAEWVTKPRVRHYGE 384 Geobacillus ka...
5_pfamImport  298 GISRKDDYRKFLELFLQCEDLEEAQKLSAHVFGVQKIQHFK--TL----EPREGEGINDSIYKDEPAVFLLKPHTRAYRE 371
WP_013485164  311 GVSRKEDYKKFLRLFAECENLKEAHKLFAHVFGVASVRHFT--IN----SARDTDNINSSIYEEAPCVYLLDTRSRQYKP 384 Ethanoligenens...
CDD28320      308 GVSNKAELRHLMTLFAGVPSMEDAHRLSALVFGSQQCRHFI--RN----AERETERIDLSTYEEPPLDYALQPRLRTYKP 381
WP_014354596  310 AINRKEEYRKLAELFDQCQDIKEAHRLSSLSFGIFQMKHIK--SD----HFRETESINSQVFEEIPAITTLKPRVRGYQE 383 Acetobacterium...
CDE45542      308 GANRKEEYKKLAQMFLQCEDMNQAHCLSAMVFGVEKCLHLR--GD----FQRDTDSINSGVYEENGLQITIKPRIRTFGE 381
CDA25296      308 GANRREEYRKVAELFLKCEDVQQAHRMSAMVFGLERPYHLK--GD----LVRETDSMNQGVYEESPFEVMLKPRVRTYRE 381
WP_012784736  411 RrGAPNRAVDREAGRRQLAERAEREAAEIAEARRLLATDGPVLLSEL-AgdaGLDPRAFRLFLSVLGDALAARRpgiatt 489 Catenulispora ...
jgi:Bcoa_2037 380 K-TKPGAFRSNHEQKEKQRLAYLKEREQEKQLIEKYMKNGEIRLAEI-G---TVEPFVRKVLLGWIGKSMAAKN------ 448
MA:Aflv_0267  392 K-KKPEAMTDRRKEKEEAMTAYLAAKQQEEEALAQLITDGKIVLQEL-P---VVASHIRKTLLGWIAKAMGRED------ 460
Q5L378        385 K-KKPQAIEDKEREKEEARLRYLEEKAREEAELKQFVTDGKIVLADL-P---EVTPYVRKTLLGWIAKAMGREG------ 453 Geobacillus ka...
5_pfamImport  372 K-KDRRGFTDKSLEKYMQREKYLQKIKRQKEIVMYYIKDNKITFSEIeE---VISEETRITFLQWITQANMNSR------ 441
WP_013485164  385 R-IDKSGFSSKSLEKAALRQKLLEEQERTKRLALQYIRNGKLDFSTItD---TLEPSTRQIFLNWVVLANNASD------ 454 Ethanoligenens...
CDD28320      382 R-MDRSGFADKSAEKAAQRKKILEEERRLREKTLHYVHEGRLDFSALkE---PVPPEVRSVFLSWVAMANLAPD------ 451
WP_014354596  384 K-AQRTPIHSNSDRKEAMMKQIRRERQMEEKTIENYVVDDGIDFATL-P---VIERHVRTTLLKWLSKGLAGFE------ 452 Acetobacterium...
CDE45542      382 K-TKRSHIQDHSVQKEQARKAAIEKLQNEKATVASFIKDKKIVFSDL-P---VISEHTRNILLRWLSKALERED------ 450
CDA25296      382 K-SGRSAIRESAEEKQRTRRQMIEKQREDMRRLRELESGGKIDFSTL-P---VIESHVREILLKWISDAMENPA------ 450
WP_012784736  490 TATSGDGTMEIRLKLV-DAGqIVTIPTEDGVLSGPEHV 526 Catenulispora acidiphila
jgi:Bcoa_2037 449 HEVKTDYGMTVKVAm--NPDhLITLDAEDGKLIMPDVV 484
MA:Aflv_0267  461 RIVQTENGWKVKVV---QREgTITLKAEDGMLMMPNYE 495
Q5L378        454 QAMKTENGWVVNVV---NKEgTICLRAEDGELVMPNYE 488 Geobacillus kaustophilus
5_pfamImport  442 KTGRTEYGQEYRLT---QTKgKCVLRCEDGDLVMPAFV 476
WP_013485164  455 RHAITEYGQKFHLL---RQPgSCVLHCTDGNLTMPAYV 489 Ethanoligenens harbinense
CDD28320      452 GSGITQYGQRFFLEK--RGEgTCQLVCTDGTLSMPDCV 487
WP_014354596  453 KKGKTEDGRVYQVELPkESDrRCLLRCEDGDLEMPAYV 490 Acetobacterium woodii
CDE45542      451 GKAKTEDGKVYYISNP-KEKnNCIVECEDGYFQMPAFE 487
CDA25296      451 GAATTEEGQHYMLDMS-RKEeRCVVHCEDGNFTMPKLA 487
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