2GJI


Conserved Protein Domain Family
VP9

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pfam09625: VP9 (This model is not part of the current CDD release)
VP9 protein
VP9 is a protein containing a ferredoxin fold. Two dimers come together to form one asymmetric unit which possesses a DNA recognition fold and specific metal binding sites possibly for zinc. It is postulated that being a non-structural protein VP9 is involved in the transcriptional regulation of the White spot syndrome virus, WSSV, from which it comes. WSSV is the major viral pathogen in shrimp aquaculture. VP9 is found N-terminal to the pfam07056 domain.
Statistics
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PSSM-Id: 518972
Aligned: 5 rows
Threshold Bit Score: 112.933
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2GJI_A      7 FQTDADFLLVGDD-TSRYEEVMKTFDTVEAVRKSDLDDRVYMVCLKQGSTFVLNGGIEELRLLTGDSTLEIQPM---IVP 82  Shrimp white spot ...
Q8VAC8     28 LKVKNGFTISGEN-PDKYEHILLSFKSVDRVTKSELRDGLYIVRLKDKEVLHIKNGVHRLRQLTGDNTLQVGLKythNLP 106 Shrimp white spot ...
NP_477753  22 LKLRSSFLMIGKK-TSKYEQVMGVYEAIESIRQSELSEDTFVVHVKKDKQLKFARGLKRLQELVEDDSLRIERIs--CAP 98  Shrimp white spot ...
NP_478030   7 LKVKNGICLSGEN-TENYERVLLTFKSVKSVRRSELKEGHFIVRLRDKEVLHIKNGNERLRQLTGDPTLQIGLKytsSLP 85  Shrimp white spot ...
Q8VAY4     22 LQLRSSFLMIGEKqYEKYEEVMSTFEAVETIRKSEFRDGVFIVQLKENKHITFEGGLKELRELTGDNSLKIESLlssIKP 101 Shrimp white spot ...
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