3WZG


Conserved Protein Domain Family
Cas_csx3

?
pfam09620: Cas_csx3 
Click on image for an interactive view with Cn3D
CRISPR-associated protein (Cas_csx3)
This entry is encoded in CRISPR-associated (cas) gene clusters, near CRISPR repeats, in the genomes of several different thermophiles: Archaeoglobus fulgidus (archaeal), Aquifex aeolicus (Aquificae), Dictyoglomus thermophilum (Dictyoglomi), and a thermophilic Synechococcus (Cyanobacteria). It is not yet assigned to a specific CRISPR/cas subtype (hence the x designation csx3).
Statistics
?
PSSM-Id: 401527
View PSSM: pfam09620
Aligned: 18 rows
Threshold Bit Score: 78.4871
Threshold Setting Gi: 121694515
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
3WZG_B           21 HFEIEKPIKPEI-LKEIEI--PS-VDTRKG---VVISGRGPXWXHCFLAHKY-HHTPF--VAVYDPRL-GAVVVQSHS-E 88  Archaeoglobu...
WP_014276695     31 lvTKDRLISPED-LRDQTL--PPhIDYKGG---IVISGRGPIWLYGYLIHEL-HPAAW--VACYDPRL-GAVVVSTHSrQ 100 Arthrospira ...
EKQ67327         27 LTTTDRLVEPGH-LNDLEL--PPgIDTRGG---VVLSGRAPIWLYAYLVHEL-HPTAW--VACYDPRL-GAIVVATHSrQ 96  Oscillatoria...
Q2JNR6           50 LTRPDRLVFPED-LAQLQL--PAgINAQLG---VVLTGRAPIWLYGWLVHEC-HFTRW--VACYDPRL-GAVVVSSHTpE 119 Synechococcu...
ASGPB:GKIL_2353  37 LLRPDRRLEPED-LPRLLL--PEpVHGV-G---LVISGRGPLWLYGHLVHRY-HSAAW--IAIYDPRL-GAVVVESHVpG 105 Gloeobacter ...
A0B6V9            8 HIGVESPIAPDEpLPPL----PP-IPRGAL---VVVEGRAPIWRYGLALHRL-HGSPAgaIAVFDPRL-GAVVVASHTpA 77  Methanothrix...
O66699           27 EFELKRDLVPED-LKKINP--PDaVKNKFAntfIVLSGRGPIWLYGFLIHFY-HPTKG--IGVFDPRLgGAVVVSSHSpN 100 Aquifex aeol...
WP_012582986     26 yFKLKSNLDPSI-LKKISP--PK-INLRRG---LIISGRGPIWLYAYLVHYY-HPTPF--IAIYDPRI-GAVVIQSHIkS 94  Dictyoglomus...
jgi:Toce_0531    16 HFELEGPINPEI-LKDICP--PK-VNSTKG---LIISGRGPIWLYCYLVHYY-HFTVF--IATFDPRLgGAVIVESHIpE 85  Thermosedimi...
WP_012965029     19 EFELEGPISPQD-LPEIEKmlPE-IRGAHV---LVISGRGPIWLYCVILHKYmHMFPA--IGVYDPKLeGAVIVVSHTrY 91  Ferroglobus ...
3WZG_B           89 LREGDVID 96  Archaeoglobus fulgidus DSM 4304
WP_014276695    101 TQVGQVLS 108 Arthrospira platensis
EKQ67327         97 TQVGQVLP 104 Oscillatoriales cyanobacterium JSC-12
Q2JNR6          120 VRVGQVIP 127 Synechococcus sp. JA-2-3B'a(2-13)
ASGPB:GKIL_2353 106 AYLGQVLp 113 Gloeobacter kilaueensis JS1
A0B6V9           78 YRPGQVVD 85  Methanothrix thermoacetophila PT
O66699          101 KKVGDVIK 108 Aquifex aeolicus VF5
WP_012582986     95 INVGDVID 102 Dictyoglomus turgidum
jgi:Toce_0531    86 FKPGNVIM 93  Thermosediminibacter oceani DSM 16646
WP_012965029     92 ADVGTVIP 99  Ferroglobus placidus
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap