5WEC


Conserved Protein Domain Family
YscW

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pfam09619: YscW (This model is not part of the current CDD release)
Type III secretion system lipoprotein chaperone (YscW)
This entry is encoded within type III secretion operons. The protein has been characterised as a chaperone for the outer membrane pore component YscC. YscW is a lipoprotein which is itself localized to the outer membrane and, it is believed, facilitates the oligomerisation and localisation of YscC.
Statistics
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PSSM-Id: 518971
Aligned: 33 rows
Threshold Bit Score: 71.1763
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5WEC_A           7 QSITGSVAYRERIALPDN-AVVTVYLQDVSLADAPATVIAKQNFITNGmQVPLEFNLAYDSRKIK-ASHRYSVSARIEVD 84  Vibrio choler...
WP_081768447    43 DSVTGTITYRNRMALPPT-AVVRVVLQDVSLQDVAATVLDSVTIRPNGrQVPFAFALRYDPALIK-MSNTYTVQARITDG 120 Hymenobacter ...
Q60BB9          30 GKVTGTVSWRDRVELNPN-AELIVSLEDVTRQDGRPVLVGMAEDTWPG-SSPVSFEVSFDRRVVA-EDRHYRVRAVVKQD 106 Methylococcus...
WP_012259202    29 ASLSGIITYREQIALPAD-ALVTLQIAEVTSQGTGGRVVVEQTFTTNGaQPPFRFNLAYNPALID-AGRVYTLQGRIQSG 106 Chloroflexus
WP_013344518    28 VRVSGVITYKEATLLPDG-SRVVVAIID---AKTPGVILTQKEFDVG--KLPVPFYFSVPEDILD-KKAEYVVWAAVRVN 100 Ferrimonas ba...
jgi:Fraau_3273  36 SSVSGTVTIAAGGAQPTDqAKLELSIVDA--ANPAGTPLVAKEIQPAA-QFPLKFELPINVQDVN-PADLYVVHAEI-ID 110
Q87P18          34 ANVYGWISV-EGYHPPVS-TYIEVEMC----QDFENQCLTVASQQYQGvQLPVQYSFLIAP--IQaGKGEMKVIGKLYSQ 105 Vibrio paraha...
P26994          23 VTVGGSVG---GVSLQARqAQLRLRLYAV--VQGRMQTIAERRYRVSG--LPLRYAFDLEVDRLE-GEALY-LRTELSWV 93  Pseudomonas a...
Q7N0X8          27 RLIEGDVTMRA--SLPRT-ANVEVSLLTV----VEGKVLTVGEMHYRLdMLPVTFSMRLNP-QFS-HGELF-LRARLRWD 96  Photorhabdus ...
WP_013109020   170 STLVGTVTYRERMALPPN-SVVEVRLVDITDNPRFPRVLVDEVIENPR-SVPVSFRLNFDGDEID-QRRIYAIDAQIWTQ 246 Planctopirus ...
5WEC_A          85 GKLRFITDTHYGVITDPEATKHV 107 Vibrio cholerae O395
WP_081768447   121 GRLLYLNDEAYPVITGNHPKQVE 143 Hymenobacter swuensis
Q60BB9         107 GETVLASRHGVPVLTFGHSDRAD 129 Methylococcus capsulatus
WP_012259202   107 GRTLFSTNTLIPVITGN-APRTD 128 Chloroflexus
WP_013344518   101 GRPILQTFDLYPV-INNKEFSAE 122 Ferrimonas balearica
jgi:Fraau_3273 111 GERHFVAPLQAPVLTQGKPATVT 133
Q87P18         106 GQIIAQNEQKY--IFREGSQKVD 126 Vibrio parahaemolyticus
P26994          94 GVAAVQASAWQQV---AAGVDER 113 Pseudomonas aeruginosa PAO1
Q7N0X8          97 GKRAVQAKSQQRIIA---GKRIV 116 Photorhabdus laumondii subsp. laumondii
WP_013109020   247 GRLQWSTATPVQVITRG-NPNRS 268 Planctopirus limnophila
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