Conserved Protein Domain Family
Stm1_N

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pfam09598: Stm1_N 
Stm1
This region is found at the N terminal of the Stm1 protein. Stm1 is a G4 quadraplex and purine motif triplex nucleic acid-binding protein. It has been implicated in many biological processes including apoptosis and telomere biosynthesis. Stm1 is known to interact with CDC13, and is known to associate with ribosomes and nuclear telomere cap complexes.
Statistics
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PSSM-Id: 401511
View PSSM: pfam09598
Aligned: 69 rows
Threshold Bit Score: 31.5098
Threshold Setting Gi: 1129838941
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EEF50247       1 MATMNPFDLLGDDDAEDPSqliaaaaavpkkaqsqpLAKQQPQSLPQAKQQQPAKLPSKPLP----PSQAVREARNEG-- 74  castor bean
EEH08464       4 VRSKNLYELLGNDPEEDSD-----------------REPSPPTSAVTKPGPRYGKREGPSEP----PRSANP--ALARpr 60  Histoplasma cap...
XP_002796180  22 PTKQNLYELLGNDPEEDSD-----------------REPSPPTSAVDKTGPRHGKRDGLSDP----PRTSNQTSARSSnr 80  Paracoccidioide...
EFW20329       4 VRSKNIYELLGNDPELDPD-----------------REPQPPVKVVDKTAPRHGKRDGPVQPrgsnPALS---------- 56  Coccidioides po...
EGE02516       4 VRSKNMYELLGNDPELDPN-----------------REPEPPVQVVDKTAPRRGKRDGPNE-----PRDAVAPP------ 55  Trichophyton eq...
XP_003301515   4 IASKNIYELLGNDPELDPN-----------------RPADPPTRAIEKPVMRHGKRDGTDAPkp-iPERNSHQTrakqtd 65  Pyrenophora ter...
EHY57641       5 VKSKNLYELLGNTSDQDSD-----------------REPEPPTKAVEKPVPRHGKRNAPEVT----PVEAAGNVav---- 59  Exophiala derma...
CCF42861      12 FPLQNLFELLGNDAEDDT--------------------PQAPVKTVEKTTMRSTKRGVEPEA----PSRAAAg------- 60  Colletotrichum ...
XP_007814605   4 VASQNRFAFLGND--DSGE-----------------DKPIVPVKTVDKATARTTKRNAEPQA----PAAPTRGT------ 54  Metarhizium acr...
EHK41418       4 VASQNRFAYLGND--SDGE-----------------EKPVVPVKTVDKATARTTKRNVEPQA----PAAPLRTG------ 54  Trichoderma atr...
EEF50247      75 -GHGG 78  castor bean
EEH08464      61 gGR-G 64  Histoplasma capsulatum G186AR
XP_002796180  81 gGR-G 84  Paracoccidioides lutzii Pb01
EFW20329      57 --RGG 59  Coccidioides posadasii str. Silveira
EGE02516      56 --R-G 57  Trichophyton equinum CBS 127.97
XP_003301515  66 sanen 70  Pyrenophora teres f. teres 0-1
EHY57641      60 rGRGG 64  Exophiala dermatitidis NIH/UT8656
CCF42861      61 -NTGA 64  Colletotrichum higginsianum
XP_007814605  55 ----G 55  Metarhizium acridum CQMa 102
EHK41418      55 ----G 55  Trichoderma atroviride IMI 206040
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