Conserved Protein Domain Family
Spore_III_AF

?
pfam09581: Spore_III_AF 
Stage III sporulation protein AF (Spore_III_AF)
This family represents the stage III sporulation protein AF (Spore_III_AF) of the bacterial endospore formation program, which exists in some but not all members of the Firmicutes (formerly called low-GC Gram-positives). These proteins have the typical RBM fold conserved in T3SS/flagellar systems. The RBM fold of SpoIIIAF contains two unique features, extended N-terminal helix, associated with multimerization and an insertion at a loop region that can adopt two distinct conformations.
Statistics
?
PSSM-Id: 490472
Aligned: 71 rows
Threshold Bit Score: 66.8795
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_013495597  12 VLVLILTGVVELALPAGAVRRYVQVVLGLLVLLAIIRPVLAWL---NSEPADLV---PA-WQRALEAAAAGAWAGGGSQG 84  Thermaerobacter...
Q97HC4        13 CTAALFITVIEIILPDNKLKKYSKFVLGLILMTVIVQPVIKVF---NNADNIN----KYiVNAQNVFEKNTYDQELKGSD 85  Clostridium ace...
WP_012101604  13 CTAVFFITAIEMLLPDNSMKKYCKFVLGLILITVFINPLIKIF---NKDFDINSytaKAiESFEENTKSEKSLKDFNEYK 89  Clostridium klu...
Q894G1        14 ATVVLFITAVEMLLPNNNLKKYSKFVMGLILMVTLINPLIKLI---DKDFNIN----KYsYEFSKGIDHEESKESFFQYK 86  Clostridium tetani
WP_044037826  14 VAIVFFST-VRLLLPNNSLKKYINLVFGLLLIGIVIDPITKFMlntSID--------KEvNDFYDNLDKKYSNTTLNTYA 84  Clostridium bor...
WP_015925364  13 VTITIILVLFEIIMPSGKIKKIISLIAGFILLIAVINPFLALK---NKNFNLGQ---NV-ISDSMYIDKNELEASSRLLK 85  Ruminiclostridi...
WP_014255247  13 aaLVIFIVLLEMLLPSEKMKKMVNLVSGLILVIALINPVLGFL---QRGIDLEV---YQ-MSSSNFIDKKEIMANSQVLR 85  Acetivibrio cla...
WP_012063625  12 lsVIIFVTFIEILIPNSNYKRYVNVVIGLLVMVIILSPLNKLI---RGDVDMTE---SM-LETSQKIEHLTMEKRLDSYE 84  Alkaliphilus me...
WP_012159472  12 vSVIIFITFVEILIPNSNNKRYINVVVGFLLMIIILNPLTKFI---AGEIDFEE---SI-LKSLNQIEAETAKNVINNIQ 84  Alkaliphilus or...
WP_013778471  13 VLVVMFTTFIGFLIPENKFLKYIKVFLGLLVMLAIINPLLQIF---KKDIHLTE---IP-LVFEDFVDKNTIKYNANILN 85  Tepidanaerobact...
WP_013495597  85 GVNDALleaardrtrslALEVHRQRLVALVREEVRAaAGMEpLAIDLD----LVADPSSprwgavTGVTIHLPArvvvpa 160 Thermaerobacter...
Q97HC4        86 GEEINS-----------IVDEFKKNLEDKCSKMLK--NKYPdNDYSVTadvqYSSEKKTvl---iKKLNIGVKN------ 143 Clostridium ace...
WP_012101604  90 EKSKAD-----------TIEAFESNLKLSCEKNLK--EKYPdGNYKVTikadYDEESNIvy---vKNVNVEIQK------ 147 Clostridium klu...
Q894G1        87 EKNIER-----------TKENFNKNLQEVVDKKLK--NKFPkGKFKVDtkveFNEEDNNft---iEGIKVGFKD------ 144 Clostridium tetani
WP_044037826  85 EKDKDL-----------TMNTFKNNLDESIKNLLK--KNFQnIDFEVDtkvqYKDKEVLi-----ENVSVTYYS------ 140 Clostridium bor...
WP_015925364  86 DKQMKQ-----------VSQVYKKKVITSIQEQAQKvEGVSqAKADIE----INEDYSSnkfgeiTRVNLQIKRgkkqs- 149 Ruminiclostridi...
WP_014255247  86 EEQTRQ-----------ITDLYRNKVISQVESLVREvKGVLdVKADVI----INDDYSDekfgevKRIYLELKLgeede- 149 Acetivibrio cla...
WP_012063625  85 AHQSEM-----------IIGVYEDNLKKQIKMRIEDrMDYRvASIDLD----IEVKDQAnlg-hiNEISLTLHSqan--- 145 Alkaliphilus me...
WP_012159472  85 YSNEEM-----------VISLYKKKIVEQVTTRLEKnTDYLvKDVLVN----IVEDINSanfgsvSSLDITLTEnqk--- 146 Alkaliphilus or...
WP_013778471  86 KKNNEL-----------AINEYKYQVEKYLTQEIKNiAPYDvKNVKIT----IDENYSDesfgkiTQLSVTLGKepaqk- 149 Tepidanaerobact...
WP_013495597 161 ggsgavpggvsaggngaapgtgpaaeappaggfspqaapgPSIQPVEPVRIgpigpaggaaagagrargsggagtlggsg 240 Thermaerobacter...
Q97HC4       144 ----------------------------------------NNVKKIEKVQI----------------------------- 154 Clostridium ace...
WP_012101604 148 ----------------------------------------GSVEKVKKVDV----------------------------- 158 Clostridium klu...
Q894G1       145 ----------------------------------------KRVEKVKKVQV----------------------------- 155 Clostridium tetani
WP_044037826 141 ----------------------------------------GMVKPIEKVTI----------------------------- 151 Clostridium bor...
WP_015925364 150 -----------------------------------dsvriNSVIPVKKIDIslpf------------------------- 169 Ruminiclostridi...
WP_014255247 150 -----------------------------------kakgiEKVKSIDKVKI----------------------------- 165 Acetivibrio cla...
WP_012063625 146 --------------------------------------evIENANIELVKV----------------------------- 158 Alkaliphilus me...
WP_012159472 147 -------------------------------------dnvELESKIKPVKI----------------------------- 160 Alkaliphilus or...
WP_013778471 150 ------------------------------------neskKEKITVETIKI----------------------------- 164 Tepidanaerobact...
WP_013495597 241 atggsgtapaaGAEREVMLPAGTRR------VLEGRVRQALAARLDLDPTAVRV 288 Thermaerobacter marianensis
Q97HC4       155 -----------DNDKENTESDIDE-------KTKKEIANYISDEMEIPYSDIKI 190 Clostridium acetobutylicum
WP_012101604 159 -----------SGKTTSVSNFNEESn-----EQCNKIKNYLSKELNVSEDVIHV 196 Clostridium kluyveri
Q894G1       156 -----------SINENDNNSEED--------ELSKNIRNYLSEELELSKDIISV 190 Clostridium tetani
WP_044037826 152 --------------GEVKEKDEHLD------KEGTDIEKFLCDELKIDSNKINI 185 Clostridium bornimense
WP_015925364 170 -------vngkSKKKVEGPTDNENK------KITEQVKQTINKSFEIHKDNIIV 210 Ruminiclostridium cellulolyticum
WP_014255247 166 -----------VVGKEKKQESEEWTntkideEIRKEIEKRIENMLNIQKENIVI 208 Acetivibrio clariflavus
WP_012063625 159 -----------SVQISEKNNNTQDIksisisNEEEDVIRELSDYYNIAKDNVFV 201 Alkaliphilus metalliredigens
WP_012159472 161 -----------NVSLGDKINNTVKAnsilisSEEDALKKELENFLNVSKENINI 203 Alkaliphilus oremlandii
WP_013778471 165 -----------GYNQSEKEDIDIECdq--knNEVENIKEYLHITFGIPKENIHM 205 Tepidanaerobacter acetatoxydans
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap