Conserved Protein Domain Family
FYDLN_acid

?
pfam09538: FYDLN_acid 
Protein of unknown function (FYDLN_acid)
Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.
Statistics
?
PSSM-Id: 490446
Aligned: 49 rows
Threshold Bit Score: 65.0982
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q0ATJ0         1 MAKPELGSKRACPSCSAKFYDLGR-RPARCPKCETEFDPEREdPRLKAKLEAAEEDdspkksvkTDEEDGYGDEAdd--t 77  Maricaulis mari...
7_pfamImport   1 MAKEEWGQKHTCRSCGARFYDMRR-TPVTCPKCGAEQPQIEE-TRSRRAAREADELarer-aaqARKAKVVPAEV----- 72 
Q2VZA7         1 MAKPEWGQKRTCQSCGCRFYDLTR-TPIVCPKCGSTVEPDMP-FKVRRGSAAAAEKvapvaaaiPVAANIDVDDLpv--a 76  Magnetospirillu...
WP_012567658   1 MAKAEWGTKRICPNCGTRYYDMRK-EPPACPSCGTVFDPEAL-LRSRRARPIPVEEvkkp-pveADEDETLGIDSee--g 75  Rhodospirillum ...
Q2G8Q2         1 MVKPEWGAKHSCPKCGTRFYDLGNsDPVTCVECKYSWHPDPV-LKSKQPIPYEEIQkdk---vdVAPDVDL-ADEdldid 75  Novosphingobium...
Q2N9Q2         1 MAKPEWGTKRTCPKCGTRFYDLGKdDPVTCIECGEEWTPEPV-LKTKQPIPFEE-Ekkk---kdSEADSDL-ADDdldid 74  Erythrobacter l...
Q5NLJ2         1 MIKPEWGTKRTCPKCGTRFYDLGKeDPVTCIECGTEWTPEPI-LKSKQPLPFDD-Qkkgd-eagKSDDADLEADLdl--- 74  Zymomonas mobilis
WP_025293433   1 MVKPEWGTKRTCPKCGTRFYDLGKdDPVNCIECGNQWEPEPV-LKSKQPLPFDA-Pkkd---akVADDADL-DNEdld-i 73  Sphingomonas sa...
4_pfamImport   1 MVKAEWGTKRTCPKCATRFYDLGKdDPVTCINCGTAWEPEPV-LKSKQPLPYEEAPkkv---ieTADGEIETADDdldld 76 
Q1GT17         1 MIKAEWGTKRSCPKCATRFYDLTKdDPVSCINCGYSWIPESV-LKSKQPMPFEEAEkp-----gKIAKDDVAADEdldld 74  Sphingopyxis al...
Q0ATJ0        78 PEVDADTLARKpag---ddDDDDdddddgasglsddlpdgfgedgvDDDADDDDdgddtGVLIDDDE 141 Maricaulis maris MCS10
7_pfamImport  73 EDVDEEGFDEAfe----ddDEDDvgi-----------------edaSELGDDDVg----DVRLGDED 114
Q2VZA7        77 EDEDEVIDGENe------tADDDe---------------------sGLIEDASD--------LGEDD 108 Magnetospirillum magneticum ...
WP_012567658  76 PARNDEDTETTddvdvadiEEDDldeevg------------seedeDVLPEDAD-------ELGDED 123 Rhodospirillum centenum
Q2G8Q2        76 EDGD---------------SPDNd---------------------vDLGGDDDL-----GVAGHDGD 101 Novosphingobium aromaticivor...
Q2N9Q2        75 VDEDDD-------------SPDNe---------------------vDLGGDDDL-----GVSKGKgd 102 Erythrobacter litoralis HTCC...
Q5NLJ2        75 dDTDDV-------------SPDDdv--------------------dDLGGNEDI-----GVNTSDDE 103 Zymomonas mobilis
WP_025293433  74 gDEDSP-------------SPDDe---------------------vDLGGDDDL-----GVNTEEAD 101 Sphingomonas sanxanigenens
4_pfamImport  77 LDVDDDGD-----------SPDNd---------------------vDLGGDDDL-----GVDAGGDD 106
Q1GT17        75 VDVDEDSD-----------SPDNd---------------------vDLGGDDDL-----GVATGDDE 104 Sphingopyxis alaskensis
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap