Conserved Protein Domain Family
FYDLN_acid
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pfam09538: FYDLN_acid 
Protein of unknown function (FYDLN_acid)
Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.
Links
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Statistics
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PSSM-Id: 401473
View PSSM: pfam09538
Aligned: 66 rows
Threshold Bit Score: 65.4418
Threshold Setting Gi: 315417379
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
jgi:Astex_2367         1 MADPALGTKQICPN--CTAKFYDLNKRPAHCPKCAFEFDPEEA-LRTRRTRVRPVAP--DEYEMDDEAEDQVKGKTPGE- 74  Asticca...
WP_015272529           1 MAKEELGIKRTCPD--TGKKFYDLNRDPIISPYTQKSWPLSYFd--------------kTSSILKDIEDDEIGGETVEGp 64  Liberib...
zhongguo:SL003B_4183   1 MAKPELGTKRLCPS--CGAKYYDLNRDPITCPKCGTIFDVVSS------ARAVKASRv-IETEEEDEEEDIAAPELVTL- 70  Polymor...
jgi:Rvan_0915         25 slKAERGTKRVCQS--CGSKFYDLNRDPIVCPACQAVYQDGGV-----------------------PSRLPAGNNLDAD- 78  Rhodomi...
WP_023788740           2 atKQARGTKRTCQSseCDARFYDLGRSPIVCPICGTVYELASS--PLGAAAASEERSs-RRGRKPDYAVKPASEEAADD- 77  Hyphomi...
CCB63766               2 atKQERGTKRTCQN--CDERFYDLGHDPIICPFCGTKYVIASSpAALAALQAEQRDLaaKKAKKPV-SDDDGDLPAVEG- 77  Hyphomi...
CCJ07572               1 MAKPELGAKRQCQS--CGTKFYDFNKDPITCPKCGAVYQIVAL----------TRAAa-RAQQEEESELEKENPETVSL- 66  Methylo...
WP_012336182           1 MARPELGLKRQCMS--CGAKFYDLNRDPATCPKCGTVYQIAAL-TTTRVPPPAIASR----AADEEPDDEAGTPEMISL- 72  unclass...
WP_012322502           1 MARPELGLKRQCMS--CGAKFYDLARDPAVCPKCGAVYQAVAT---SSRAAPPALSRg-PANNDDEDETDEKGPEMVSL- 73  Methylo...
WP_012589658           1 MAKPELGNKRQCQN--CGTRFFDLNKNPIVCPKCGTVFQGAPL------------SRaaQRAAAADDDEEAAPAELVSL- 65  Methylo...

jgi:Astex_2367        75 -EDEDEEpeivtpeid------------evvaddsllADEDdeldpadparvapdavdmdieDADLVDDDAD-------D 134 Asticca...
WP_015272529          65 hEEIISEdedv-----------------------svvVDDDle-----------------dvGEQVISLEDD-------D 97  Liberib...
zhongguo:SL003B_4183  71 -EEADAEaegdg---------------------vpelEDEE-----------------------DLGDDTAE-------D 98  Polymor...
jgi:Rvan_0915         79 -DDAVLDagrgglefvpldevareeelpdieggdladVADD---------------------EADIDTGADD-------E 129 Rhodomi...
WP_023788740          78 -ADELEVe----------------------------dSDDD-----------------------DSISATED-------E 98  Hyphomi...
CCB63766              78 -EEALAD------------------------------VETD-----------------------DAGGADDD-------E 96  Hyphomi...
CCJ07572              67 -EEVEETeavaesid---------------veddveiEGDD----------------------------AED-------D 95  Methylo...
WP_012336182          73 -DEVEAAeega-----------------------davVDDD---------------------ADVGGAGGDD-------D 100 unclass...
WP_012322502          74 -DEVEAAedda-----------------------dptPEDD---------------------SVEDGDSSDD-------D 101 Methylo...
WP_012589658          66 -EEVDAEa-----------------------------DADK-----------------------LVVAVDEDveievadD 92  Methylo...

jgi:Astex_2367       135 VPFLEDD 141 Asticcacaulis excentricus CB 48
WP_015272529          98 AFLETTD 104 Liberibacter crescens
zhongguo:SL003B_4183  99 IFIDDED 105 Polymorphum gilvum SL003B-26A1
jgi:Rvan_0915        130 TFLEAED 136 Rhodomicrobium vannielii ATCC 17100
WP_023788740          99 TFLEEEE 105 Hyphomicrobium nitrativorans
CCB63766              97 TFLEEEE 103 Hyphomicrobium sp. MC1
CCJ07572              96 TFLEEEE 102 Methylocystis sp. SC2
WP_012336182         101 TFLEEDE 107 unclassified Methylobacterium
WP_012322502         102 TFLEEED 108 Methylobacterium
WP_012589658          93 PFLEEEE 99  Methylocella silvestris
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