7CQ2,4XLG


Conserved Protein Domain Family
Slx4

?
pfam09494: Slx4 (490416 is an unknown moldel)
Slx4 endonuclease
The Slx4 protein is a heteromeric structure-specific endonuclease found from fungi to mammals. Slx4 with Slx1 acts as a nuclease on branched DNA substrates, particularly simple-Y, 5'-flap, or replication fork structures by cleaving the strand bearing the 5' non-homologous arm at the branch junction and thus generating ligatable nicked products from 5'-flap or replication fork substrates.
Statistics
?
PSSM-Id: 490416
Aligned: 69 rows
Threshold Bit Score: 50.2422
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
7CQ2_D         88 FDHLTELIEA---FPDFLERIYTFEPIPLNELIEKLFSAepfvsQID---EMTIREWADVQGICLRN 148  brewer's yeast
EFN82168     1115 KEAFTKLINI---DKDLYNKILRYEPINIEQLHATLRLHg---fKCK---LSNFMNFLDEQCITFYM 1172
EGI62403     1006 TEAFMKLINI---DKALYNKILQYEPVNIDHLRCMLQTHg---fKCK---LPNLMNFLDQQCITFYS 1063
XP_046442438  972 KDHMKEFLKK---RPDIHKLVLTYEPISFEYLFAEIRKDr---iRCK---AQDLLDWLDQECITCRM 1029
Q6CFP1        733 MSELTEFMMSapeARDMWLKMLTYQPISLSQLMEFNKEHg---iKIS---KVLTIAWCDLHGVTWTS 793  Yarrowia lipolytica
XP_001837284  413 QKALMKKISE---DREIKLKILRYEPISLHVFHTLLIPGr---tKLSlkhKTMLVAFLENEGITTYD 473 
XP_002932505 1619 AEAVKRFIES---HPDLYKRILLYQPLELAALHAELKQAg---iKVA---SGKLLDFLDTHCITFTT 1676
NP_001385580 1640 EEAVRRYICS---QPALHRKVLMYQPLQLAELQAELKQNg---iPVA---MGKLLDILDAQCVTFTT 1697
XP_007499143 1758 EEAVRRYIRS---HPALYQKVLLYQPFELADFQAELRQNg---iKFA---MGKLLDFMDAHCITFTT 1815
XP_012910555 1670 EEAVRHYIRS---RPALYRKVLLYQPFELAELQAELKQHg---iRVA---TQKLLDFLDAHCITFTT 1727
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap