Conserved Protein Domain Family
Cas_TM1802

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pfam09484: Cas_TM1802 
CRISPR-associated protein TM1802 (cas_TM1802)
Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This minor cas protein is found in at least five prokaryotic genomes: Methanosarcina mazei, Sulfurihydrogenibium azorense, Thermotoga maritima, Carboxydothermus hydrogenoformans, and Dictyoglomus thermophilum, the first of which is archaeal while the rest are bacterial.
Statistics
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PSSM-Id: 490407
Aligned: 24 rows
Threshold Bit Score: 341.272
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q1AZD1         1 MIESIYQIGRAILEegGGRRTVLESLADSPPADgk----gkSYIAILKLD---TARWKLGVE-LRel------ggEKNTA 66  Rubrobacter xyl...
WP_015286123   1 MIEAIREIGEYANKg-AG-DNLLDNFSKKIPLEikk---kkQHVIIFNFD---TTNQTITCD-YEev------kpD--SG 63  Methanoregula f...
Q3AA63         1 MLEAVREVGRLATEhaSG--GFLENLCLEIDEDqgg---kkQHVVIIDFA---TANNSLKIT-PKei------tpG--VT 63  Carboxydothermu...
WP_013781805   1 MLEAIKKLGDVAMs--SG-QDFLEALALPVGAKrgd---kdQYLVIIKID---TQDASVNFQ-PVki------ddY--TA 62  Mahella austral...
WP_011994102   1 MLEGIVQIGRALLEnkSLIDSLIK------ELPakdkkgnlYHVLKLKFS-----KENLELDvSEei------dsD--TA 61  Fervidobacteriu...
WP_015738984   1 MLEAIELLGKTVGg-gDLIAGIIEDLKNIPKDPee-----gFYLVKLDFReeePGKLRLRFD-FEeipknkeqryE--FL 71  Ammonifex degensii
WP_013704836   1 MIRELTRLGEAVLAndEA--GVLEALIEDIGNLkpkr-gnaPHLVVLNLS----SEGRLEWR-TEvl------dpP--RA 64  Marinithermus h...
WP_012876351   1 MIESIYQIGEAVRKegQGTRAFLESLAVEVPPVkk----gsAHIAIFDFN---LESGKVKVE-LRea------grE--TP 64  Thermobaculum t...
WP_006299859   3 MLNALLDIGKALGG------DELECATKMPMAE--------GTEIQIWLDvedPAARPLNVLgVHrvtl--advdPRNKS 66  Aminomonas pauc...
WP_014731692   1 MLKSTYEIGRIVSR----GKDETQMYTTDIGETy-------IHELTIVLE---NNGETIRYSgCDk--------rEKTRR 58  Mesotoga prima
Q1AZD1        67 AR-YlWLGNAPAAMDDQDRLTTNNLV------------YLVSQTIPNLlmegrldpasalygklkrlkdelyldlgepse 133 Rubrobacter xyl...
WP_015286123  64 KK-YlWLGN-NPRNKPQIYFTSDVFP------------FIFGDAISNIlervdnplknelqmvlekf-----------fi 118 Methanoregula f...
Q3AA63        64 EReYlWVGNADGSSSPQWYLSTNNLS------------FLVSQTLPNLlevlpegsklaqnvqkvldl---------yff 122 Carboxydothermu...
WP_013781805  63 QR-YiWVGNADGSASPQWYATTNNLG------------FIVGQAIPNLikklpdntslkvalqdvldn---------myy 120 Mahella austral...
WP_011994102  62 RK-YlYIGTADGPNAPQWYAANNKIT------------YFLSETLFNLtnidfgeplnqklkhifekfy--------vdl 120 Fervidobacteriu...
WP_015738984  72 TR-WrHVGNASG-HNPQKFLTTNQLH------------YLTGQVIPNLlqelssqgeegselarklk------------i 125 Ammonifex degensii
WP_013704836  65 EA-YlWLGNPRA-NAPKVRVTTSNLA------------YLLGQTFYALtedadtppelraylervfpk---------lfw 121 Marinithermus h...
WP_012876351  65 QR-YlWIGNA-SGMNDQDRVTTKDLK------------YLVSQIVPNLllgarlsdhcplreklqqlvdvfyldigeaye 130 Thermobaculum t...
WP_006299859  67 RYlY---RDTEGSNFSYCYSSVVRMQkkelnfdeaylkKLETKVLKEFe------------------------------- 112 Aminomonas pauc...
WP_014731692  59 NYlFrEKKGNIKVPMSLTLRDAGKGS------------KAIIEKFINFgtqn---------------------------- 98  Mesotoga prima
Q1AZD1       134 lgtkgggayrryryfwdVGRLGIEG--------PGL--EELRQEVReglr----pgnVPQKVARALQSHFRQEip----- 194 Rubrobacter xyl...
WP_015286123 119 aisykekkderkiwrvdFTKFSLPTdlrptfseKNK--ELLKELSSpsqkk-dqakkNSKKYLEALSKNILTSlksklas 195 Methanoregula f...
Q3AA63       123 dtgvkegaenryryilnLEMLPGYKg------sKLL--DLIKE--Npkg------knLAQAVAKEFSKWIKDQtgls--e 184 Carboxydothermu...
WP_013781805 121 dlgpqsgaksryryvwdLGKMGMAEai----gvTTA--DIYKELINkgdd----ikkMPDRLASAVLDYIKNKtagaikr 190 Mahella austral...
WP_011994102 121 gpgikskyryalnlyyldPNVDV------------R--KLYEEYSKqnqgnd---kgflkVLEKQFEKILFENyeak--l 181 Fervidobacteriu...
WP_015738984 126 irekafscleggevvldLGRLGIAG---------EE--KAEKEeskqgk---kkakeQAKQVADVLVKLVEQKlgik--k 189 Ammonifex degensii
WP_013704836 122 hdpearggkrkyaylldAQKLGLDV---------DW--PALRDLPPk---------qRPAQLAKALTALFDLpk------ 175 Marinithermus h...
WP_012876351 131 lglpmdsgyrryrrlwdLNRMGKEG--------PDL--EALRELAKqngd----akaLPEVVAQAVIKAF--Gld----- 189 Thermobaculum t...
WP_006299859 113 ----------------tPLTTPTESsasegtfqVFQsgSIPRILTGlrqhrdelallGKDALdaakr----------dkk 166 Aminomonas pauc...
WP_014731692  99 ------------------------------ktpFAE--KVAAALVE-----------SEEIISATLDEMAENLpk----- 130 Mesotoga prima
Q1AZD1       195 erGVLFTLEL----DGELLVDD---PAYQEYLERSLIGRVFEGA--------REEGVCHLSG-RKGPVTTDI-Trf-rfK 256 Rubrobacter xyl...
WP_015286123 196 ddVSIYTIKL----NGSSLAAR---QEYRKMLSNEKIGCLFDPKdtnykkylNRQGNCSLCN-KKNIATTSTaTnl-sfK 266 Methanoregula f...
Q3AA63       185 keVALYTIYF----DGQKGVDY---REYQEKVEAAKVFDIFAGE----------EGVCHACG-NFGPITSDT-Tkl-kfK 244 Carboxydothermu...
WP_013781805 191 ddIALWTLQI----DGKLVVDD---RAYREAVEREKIDVIYQDA---------IDGICSACG-KADKVTDNT-Tkl-tfK 251 Mahella austral...
WP_011994102 182 neFGLFVIYI----DGEPLSKY---EEYRRKVLEYK--SSGEKSetsskkekSKDLRCNICG-STENLT-DDlKkm-kiK 249 Fervidobacteriu...
WP_015738984 190 rqVGLWTLLF----NGEPLVQA---EPYDRVILRYRL-AGFEGe-------dLVAGTCLVCGkEKEKVSAQAfKrlkffK 254 Ammonifex degensii
WP_013704836 176 -qGVLYTLAI----DGTPLAQL---PAYRAYMLRKLVGELFEDA---------KDGVCHACG-ARTAVNAKF-Thf-kiK 235 Marinithermus h...
WP_012876351 190 stVVLFTLSI----DGELVVDD---PDYQAYLERSYIEDAFEDP--------L-EGVCYLTG-KRGQVTTDM-Tkf-kfK 250 Thermobaculum t...
WP_006299859 167 taSFLLVFGIrsgeRFLYPGDTpvnALFSDYFWAKlgvv----------lskGKEARCSLCGqEEKH---AVnLnq-vfA 232 Aminomonas pauc...
WP_014731692 131 keGRFYTVVIkqgdRELYPGDL---DEFRQIFLRnvvs-----------aasNTFGTCFVCQeEKPI---GMkAsd-ifK 192 Mesotoga prima
Q1AZD1       257 YYITDKVGFASG-AT-KKGFGSNFALSREAYTALLVGERFVRRELGFVFA--G--ARG----YMIPDLYTve-------- 318 Rubrobacter xyl...
WP_015286123 267 YYMTDKLGFSS--DL-DGKFTRNFNICETCYGNLLSGEAFIKNNLKIKIG--K--LNG----YVIPTLLFknleldy--- 332 Methanoregula f...
Q3AA63       245 YYITDKIGYASN-HD-KKNFYKNYSLCPECYKKLLIAESFIQNKFNNRLG--N--LNL----FIIPGFLFpvnlkk---- 310 Carboxydothermu...
WP_013781805 252 YYNTDKIGFSS--YI-SGRFDKSFVLCKDCYMALLEGEAYIKNRFNTRLG--G--LNL----YLIPSFIFdvsfta---- 316 Mahella austral...
WP_011994102 250 YYTNDKITFASE-LD-PNKFYKNMVICQNCLNAILAAETYLDNKLKTKLG--D--LSL----YIFPHFIYgeplne---- 315 Fervidobacteriu...
WP_015738984 255 PYITDKVGFASG-VS-ESGFIRNFLICEECFRSFLVVENYLPQHLNFRVG--T--LSF----LLLPTFILfsdspawrqe 324 Ammonifex degensii
WP_013704836 236 LFINDKLSFAYG-LD-AENWTKNHALCQRCYTRALSGERYLERHLSTRVL--G--TET----LIVPHLdptplsq----- 300 Marinithermus h...
WP_012876351 251 YYITDKPGFASG-AT-KKGFMSNLTIGKEAYVSLLVGERFIQRYLGFRLQsiG--ANG----YVIPDVFTne-------- 314 Thermobaculum t...
WP_006299859 233 FATFDKESFLPGiRNmPGTPEKVFPLCRECLRWLSRGK----DHGDTLFR--EdrMAYplhlTVIPELFG---------- 296 Aminomonas pauc...
WP_014731692 193 FSSFDKPGFAHE-MN-DKNYYVNMPLCQDCFSKIALGKKVLDEELSMNFYas--------rvYIIPRFHSses------- 255 Mesotoga prima
Q1AZD1       319 ---------vpKGLPGALQRVLRgirSRTLFTLGRVQEED---LDEELEDFRREHLASGYMINLLFYr--QKQA-KFEVL 383 Rubrobacter xyl...
WP_015286123 333 -----arfaryITHKNNAVSNLt---VLHIFEKELKNFRD---F------EENEK--NNFVINYLFYr--SEQGrDFKIL 391 Methanoregula f...
Q3AA63       311 -----qqfqkwMEFTNNSFNNLKgysEIAGYEEMV-S--D---Y------FENRKIYNQLIFNFLFYq--KNKA-EFKVL 370 Carboxydothermu...
WP_013781805 317 -----dqldewTKYINDSFNSAKtasSIEDFEKRIKD--D---Y------MEYEDDKNNYILNLMFYq--RNQA-ELKVL 377 Mahella austral...
WP_011994102 316 -----seldlvVDKIINSYNIVKnlkGVQEFEEKI---LG---I------TDENR---YFLVNFLFFk--KSQQ-ATKIR 372 Fervidobacteriu...
WP_015738984 325 fsrlmnkltrkTQAFTDLSALIK---GEEELERTLEEL------------FEEEGIEDQALLNFLFYq--KTQS-EFRIL 386 Ammonifex degensii
WP_013704836 301 -----etldalSALLRETTSSLErleSVPELLDRLEPHTR---L---------------PQLTLLFIr--RAQS-AVKLI 354 Marinithermus h...
WP_012876351 315 ---------lsNRYARNLLISIQdlkRKVDYDLGLQDRVD---L-----VLSNERSFGSYMVNLLFYk--QSKE-NFKVL 374 Thermobaculum t...
WP_006299859 297 ---------------------SGpsmGRRPLERKTKDFLNtglTNAPGLFEALLDQDDVLVYHFLFWeqiQAQE---RIH 352 Aminomonas pauc...
WP_014731692 256 ---------alIEGAVDQIRDIKrisNLKDTVHKANRFKGfetHMLCEISEGL-----YSSLNFIFY---TVNNqEMKIN 318 Mesotoga prima
Q1AZD1       384 GLIQDIPSYRLEELRSQGRRTGRLWEelyg-------------seaRDLTLQQIYYLIpVRK-SGDDMLTk---eILAFY 446 Rubrobacter xyl...
WP_015286123 392 RLIKDVPPSRLDTILDIQQKIALKIDkgypv-----------qqgfLKISLKSLYYTIpIRI-GNKDRTYst--kFLDII 457 Methanoregula f...
Q3AA63       371 KLIKDIPPSRILKILQLFQKVNEVYKkhfnq-----------llpeLSLNLNRIYYQIpQQK-GKNSVEYr---kFLDLL 435 Carboxydothermu...
WP_013781805 378 KLIKDVPPSRFTQL-----RFASEMTghfgdai-------fgpspmWQIDLNKIYYLIpINV-GRNSIEYr---kLLDIY 441 Mahella austral...
WP_011994102 373 RFIKDVPPSIFDRIAEASKCAREIVKkaiq------------mnyeTYIDLQKIYYLIpVKVsAGEVTEYk---yILDFY 437 Fervidobacteriu...
WP_015738984 387 GLIKDVAPSRLSRLFRRSNALAQEGRrllgg-----------evkdWWIDLTRLYYLLpL-R-GRDRAEHk---kLLYLY 450 Ammonifex degensii
WP_013704836 355 EAVPEVEPSRIEAVLRAIGEANRHANtlfga----------prtgaWLPGLAALLDVLpLKH--EQGAPHaa--pALRVL 420 Marinithermus h...
WP_012876351 375 RLIQDVPEYRLQEIRRALDDISELFPely--------------gfrYGLTLSNLGWLLpVRK-SGTDLLVk---sVLDFY 436 Thermobaculum t...
WP_006299859 353 LMAEDVPPLRLTQLLHAWRRSCRMFpetqrpsatmspeekqslsagMRFVFGVLGSFAg----KSKQDQTamrdlALAVT 428 Aminomonas pauc...
WP_014731692 319 LSVLDVPPSRLRNMSQKISDIEEELrtvfg-----------neeylPSVLFGSMYDVF-----KDNRLRT-----FFDYI 377 Mesotoga prima
Q1AZD1       447 HALISGGLIDRKGLIDGFLELIrayrfr-ntaayQVSAPEEGqedlAVTRYVAQTSLLLAFLRDLDQL-KEEEVDQGYL- 523 Rubrobacter xyl...
WP_015286123 458 DAVFASRSIDYSLLIDQYTELLriifh--nrggyNVSse------sHLWRKVLQQNFALVFFRELNLL-RGFTMEkv--- 525 Methanoregula f...
Q3AA63       436 ESIFTGHPVEKSFIIRQHIELFkifaf--tkegfNVNPGSEKykeiELAKACLRANLLNLFLQELEILpKEVEAVELELd 513 Carboxydothermu...
WP_013781805 442 DDIFSGKPVSYEFLIDSFVELAriyrl---esfvNVNVRIPNdtdmAMVYAMAQANLFMEYLKQLKLLeRGVSMDSDKLi 518 Mahella austral...
WP_011994102 438 ESLLTFKPIEKETLIGKFIEATkviyl--qkngyNINK---Ds----LEFYILNANMLVKFLEKMGNLkEGNTLDTSKLn 508 Fervidobacteriu...
WP_015738984 451 QGLLRGEPIEYSFLVKEFLELAhlyltg-rfegtNQRKPNSGqeerALATQLLHAGFFLKLLREEGILkGVKDL----Ps 525 Ammonifex degensii
WP_013704836 421 RQILLGEPLSRPRLLREFLQVLryihrnnpgiyaTRSCRAPGgycpEIEDAIPRMTAFLHFLEALEML----EVNPMELd 496 Marinithermus h...
WP_012876351 437 SSIIEGGVLERRELVEAFLELVrvymf--gnpnyQVSIPKDDerdwTVLRYLAQTNVLLAFLRSMGQL-KEEEMDQGYL- 512 Thermobaculum t...
WP_006299859 429 GKLLQDEPVDLGLIKGIVCARL------------PGLLKDPNkpmkDKIPPVRRAERLVDFLARVNQEhFGQRGNHGEEe 496 Aminomonas pauc...
WP_014731692 378 EALFKDQPVSLTPLKRGTLEFI------------GSRKLRGE----PYATRAKQLITVAFFIDRL-----QKNAEGGVPl 436 Mesotoga prima
Q1AZD1       524 ----DC--------------------LSLDEEEKEYLRRLRy-DKQQTALYLLGALVAEIANAQW---RLGPEgrggeKT 575 Rubrobacter xyl...
WP_015286123 526 ---sDI--------------------GSVPVEINKFWSDIGvyDDPRKTLFLLGYLIGGIGNKQW---KAGHKn----KP 575 Methanoregula f...
Q3AA63       514 lkaeD---------------------------LE-YIRDMGy-TPQQAALFLLGVLVGEIASAQH---QSNLN-----KA 556 Carboxydothermu...
WP_013781805 519 l-reD---------------------------IKGYIEEMGy-DEPKTALFLLGYLIGQVADGQR---GSGMDs----KP 562 Mahella austral...
WP_011994102 509 v-reD---------------------------IKNYISTMGy-DEQQSAMFLLGILIGEIGNSQY---KKYNSd---kKP 553 Fervidobacteriu...
WP_015738984 526 fepdQE--------------------LMVNQEMREYLKSINy-SEPQAALFLLGYLLNEVGKGQY---SSGHQs----KP 577 Ammonifex degensii
WP_013704836 497 tklpG---------------------------YTEPIQTLGl-DAPRTALFLLGVLLARVASEQY---KRGKS-----KP 540 Marinithermus h...
WP_012876351 513 ----QD--------------------LMLLDEQREYLSRLRy-TPQQTALYLLGTIMADIAREQA---TMGGEngsgeKV 564 Thermobaculum t...
WP_006299859 497 idvqDEtmrpeetadvlkttprkhvrEAMEEMLKGFADPYLq-EPFGQGVFLAGVVLGVFAREQVgkgGDLGS-----AP 570 Aminomonas pauc...
WP_014731692 437 mgkdRE--------------------DRIEEFFNKYPAFFR--TDEEKFLFIVGQVHSRISRFQR---EKNIA-----ST 486 Mesotoga prima
Q1AZD1       576 ILNKLNYQGMTLPRIQRLATELFDKLRQYRYtdrsgerrpLLQgrNESIFAQAQELLTEEwgS-WRLTPPENVYYLLSGY 654 Rubrobacter xyl...
WP_015286123 576 ILNKINFEGMNVQAIIRLTNEVFEKLVQYK----------ILk-lHESLFYEYKKMIDIYsqS-WNLSNQENVFYILSGY 643 Methanoregula f...
Q3AA63       557 ILNKLTYQGMSLRRIISFANEVHQKLFQYK----------KLNpgTEKIYNSMKKLLDREipR-WSLSEQENVFYLLSGY 625 Carboxydothermu...
WP_013781805 563 VLDKLNYQGMTKLRVWRLSDEIFEKLRQYK----------RLa-yNEGIFAQHRMLMEKYmsD-WPLTDQENVFYILSGY 630 Mahella austral...
WP_011994102 554 ILNKLNFNGIDKSKIIKIANEVYAKLEQEK-----------IRkyHETTYAEMKRLLDENlkN-WKLNKNENLFYILSGY 621 Fervidobacteriu...
WP_015738984 578 VLDKINYQGMNWSRVLSLANQLFEKLRQYD----------RLRgqNEILYAEMKRLLDRYrqDkWPLGPEENVFYILSGY 647 Ammonifex degensii
WP_013704836 541 VLEKVGYQGMPLEKVRRFALELFEKLTEYR----------RLDasSEVVFATATELLAQPr--pWPLSDEENAFYILLGY 608 Marinithermus h...
WP_012876351 565 ILNKLNYEGMTLQRVQRLAVELFDKMRQYK----------VLTpwNEQAFAQAQGLLSEYasR-WNLTPAENVYYILSGY 633 Thermobaculum t...
WP_006299859 571 LFKQLNFGRLRRRDLQGQLGRLPGLVHQYRVp--------HAGaiQSLAGEVTRLLLEGTp----KELGEEGNFAFAAGF 638 Aminomonas pauc...
WP_014731692 487 VDLRLKAYNMRPLDFMNHFKDLKWKTTQYSKemd---pvrVRGpiMNLLQIADKYLIPSG--YeWKASIEDLNYAFLAGe 561 Mesotoga prima
Q1AZD1       655 SHR 657 Rubrobacter xylanophilus DSM 9941
WP_015286123 644 SFA 646 Methanoregula formicica
Q3AA63       626 SYL 628 Carboxydothermus hydrogenoformans Z-2901
WP_013781805 631 AYN 633 Mahella australiensis
WP_011994102 622 SYA 624 Fervidobacterium nodosum
WP_015738984 648 AYG 650 Ammonifex degensii
WP_013704836 609 GFE 611 Marinithermus hydrothermalis
WP_012876351 634 SHS 636 Thermobaculum terrenum
WP_006299859 639 lsa 641 Aminomonas paucivorans
WP_014731692 562 lat 564 Mesotoga prima
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