6Q14,6RWX


Conserved Protein Domain Family
PrgH

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pfam09480: PrgH (This model is not part of the current CDD release)
Type III secretion system protein PrgH-EprH (PrgH)
In Salmonella, the gene encoding this protein is part of a four-gene operon PrgHIJK, while in other organisms it is found in type III secretion operons. PrgH has been shown to be required for type III secretion and is a structural component of the needle complex, which is the core component of type III secretion systems.
Statistics
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PSSM-Id: 518928
Aligned: 8 rows
Threshold Bit Score: 419.934
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6Q14_E        16 IVRLLNSSLNGCEFPLLTGRTLFV-VGQSDALTASGQl--------pDIPADSFFIPLDHGGVNFEIQVDTDATE----- 81  Salmonella ente...
1_pfamImport   1 ELRILFGPMYGVDLLLPKQESIFVfVGAETAKSQSAS----------QFASNALVIPHHKSGINFRISFDAHISHsdian 70 
Q326S1        15 LVKLTNGV--GDEFPLYYGNNLIV-LGRTIETLEFGNd---------NFPENIIPVTDS--------------------- 61  Shigella dysent...
WP_025420827  17 VLRLLNGSLKGCEYFLSAPITLFV-AGGEGQTGPRHEp--------pSLPPETIFIPRHQGGVNFEIVIATAAPHk---- 83  Sodalis praecap...
P41783        16 IVRLLNSSLNGCEFPLLTGRTLFV-VGQSDALTASGQl--------pDIPADSFFIPLDHGGVNFEIQVDTDATE----- 81  Salmonella ente...
Q7NVC0        13 VVRLLNSPLRGCEFTLQPGKTLFL-VGPESALAADGLp--------pELPADSLFVPLAEGGVNFELLLDNGC------- 76  Chromobacterium...
Q63K19        12 QLRILFGPLFGSDIAILSGEVFFC-VGEQVIDDRPAEhpenraghllERAVDTLYIPHRAGAPNFRLRFPGAPTQaarta 90  Burkholderia ps...
6RWX_S        15 LVKLTNGV--GDEFPLYYGNNLIV-LGRTIETLEFGNd---------NFPENIIPVTDS--------------------- 61  Shigella flexneri
6Q14_E        82 ----------------------------IILHELKEGNSESRSVQLNTPIQVGE-------------------LLILIRP 114 Salmonella ente...
1_pfamImport  71 kddplfdmemssqrstdhdrdvnddllrFSVEWIKGNEVTVEEGVLNSICQFED-------------------IAFAIRL 131
Q326S1        62 ----------------------------------KSDGIIYLTISKDNICQFSDekgeqidinsqfnsfeydgISFHLKN 107 Shigella dysent...
WP_025420827  84 ----------------------------SVLRVLKDDGIRETPLVANRVLTAGP-------------------QALAVRA 116 Sodalis praecap...
P41783        82 ----------------------------IILHELKEGNSESRSVQLNTPIQVGE-------------------LLILIRP 114 Salmonella ente...
Q7NVC0        77 ----------------------------ARLRIL-GDEVTESEAPFNQPLSVGA-------------------LRLALRP 108 Chromobacterium...
Q63K19        91 et-------------------geaapgdFEVDFLSADGCVTQRAAFNTVCRFGD-------------------LAFALRR 132 Burkholderia ps...
6RWX_S        62 ----------------------------------KSDGIIYLTISKDNICQFSDekgeqidinsqfnsfeydgISFHLKN 107 Shigella flexneri
6Q14_E       115 ESEPW-V-PEQPEKLETSa-KkNEPR------------------FKNGIVAALAGFFILGIGTVGTLWILNSp---QRQA 170 Salmonella ente...
1_pfamImport 132 NNTPW-S-DAVRQFLIKSt-D-ENAAetsevtadllvpsgmgqrTRRFTALACIAVALLALPLRSLISFFAD----HART 203
Q326S1       108 MREDKsR-GHILNGMYKN--------------------------PSVFFFFAVIVVLIIIFSLSLK----------KDEV 150 Shigella dysent...
WP_025420827 117 AAAAW-D-AAILDYCETPtpV-APAR------------------WRRRGVLALMSLIAL---LGAGYLLRYDivtgHEDV 172 Sodalis praecap...
P41783       115 ESEPW-V-PEQPEKLETSakK-NEPR------------------FKNGIVAALAGFFILGIGTVGTLWILNSp---QRQA 170 Salmonella ente...
Q7NVC0       109 QHLPW-Q-AEILNGFEPTgaP-AAPSsat-------------pgRAGRALLALGALCAVALLAAGGHWLWNSq---QRQV 169 Chromobacterium...
Q63K19       133 QREPW-S-EAVMHYAPHA--P-SRAAdaaepgap--gepgdggeRASRFALKLGALLVAGVALAALAYWQVQryvgAQKL 205 Burkholderia ps...
6RWX_S       108 MREDK-SrGHILNGMYKNh-S-VFFF------------------FAVIVVL------IIIFSLSLK----------KDEV 150 Shigella flexneri
6Q14_E       171 AELDSLLGQEKERFQVLPgRDKM-LYVAAQNERDTLWARQVLARGDYDKNARVINENEENKRISIWLDTYypQLAYYRIH 249 Salmonella ente...
1_pfamImport 204 KQLAAVFDTDTARNDLIT-RDGK-VYVIAKTQSDLEWDKQIALRFPAAQRPLVTSVDDLREKSEQVLDQH--NIDYFTIL 279
Q326S1       151 KEIAEIIDDNRYGIV----NTGQcNYILAETQNDAVWASVALNKTGFTKCRYILVSNKEINRIQQYINQRfpYINLYVLN 226 Shigella dysent...
WP_025420827 173 ATLGRHLAGDNGKFHLLPgKDGS-LYMLADSERDAAWGRQSLVRHTSAAAVKVLSCNDERRRVHAWLERYypWLGFHRIH 251 Sodalis praecap...
P41783       171 AELDSLLGQEKERFQVLPgRDKM-LYVAAQNERDTLWARQVLARGDYDKNARVINENEENKRISIWLDTYypQLAYYRIH 249 Salmonella ente...
Q7NVC0       170 AELSALLGDDGQRFHVLPgRDGV-YYVAAADARDGVWARQSLLRAEFRQPVQIVEPAGESERVSRWLSESrpELAFYRLL 248 Chromobacterium...
Q63K19       206 ASVNGVLAGAPVPNAILPgDDGR-IYVLSASQDGAEWDREALLKAALPEKIEVAVIGAERQRVERRLDEA--GVDFVTVR 282 Burkholderia ps...
6RWX_S       151 KEIAEIIDDKRYGIV----NTGQcNYILAETQNDAVWASVALNKTGFTKCRYILVSNKEINRIQQYINQRfpFINLYVLN 226 Shigella flexneri
6Q14_E       250 F-DEPRKPVFWLsrqRNTMSKKELEVLSQK---LRALMPYADSVNITLMDDVTAAGQAEAGLKQQALPYSRRNHKGGVTF 325 Salmonella ente...
1_pfamImport 280 F-RNIDEPELILvahQGEDEETVKKRIAEItrlLKGVLPFAKGLHIREKTLSNVAGIAGSKLTHIPVTYSRIESGGYITF 358
Q326S1       227 LvSDKAELLVFLskeRNSSKDTELDKLKNA---LIVEFPYIKNIKFNYLSDHNARGDAKGIFTKVNVQYKEICENNKVTY 303 Shigella dysent...
WP_025420827 252 I-DDPSAPELILsrqRAVLSPAEQDRLSEA---LLEMLPYARQISFGQLDDDAVVRDAENGLRQLAIGYQRVDHPNSVTF 327 Sodalis praecap...
P41783       250 F-DEPRKPVFWLsrqRNTMSKKELEVLSQK---LRALMPYADSVNITLMDDVTAAGQAEAGLKQQALPYSRRNHKGGVTF 325 Salmonella ente...
Q7NVC0       249 L-DDPRRPQLWIsrqRSPLDEASRQKLASQ---LSVLMPYAERVSIVPVDDEAASRQAEEGLSRQALPFTRNDQRDSVTF 324 Chromobacterium...
Q63K19       283 L-DAPEHPELIL---TGAAPAAARARAIGE---LRRAAPYVRDVRVIDASLGAIEQEARNALDKVGARYRLLARRGGATF 355 Burkholderia ps...
6RWX_S       227 LvSDKAELLVFLskeRNSSKDTELDKLKNA---LIVEFPYIKNIKFNYLSDHNARGDAKGIFTKVNVQYKEICENNKVTY 303 Shigella flexneri
6Q14_E       326 VIQGALDDVEILRARQFVDSYYRTWGGRYVQFAIELKDDWLKGRSFQYGAEGYIKMSPGHWYF 388 Salmonella enterica subsp. enter...
1_pfamImport 359 FINGYITDYALSEVSDLVKGFSHDWGQRKVRFGLVLNTTWLDGKSRQVGEDGYVLVDPSHWYF 421
Q326S1       304 SVREELTDEKLELINRLISEHKNIYGDQYIEFSVLLIDDDFKGKSYLNSKDSYVMLNDKHWFF 366 Shigella dysenteriae Sd197
WP_025420827 328 VINGALEDGERQRIRRYVEAFQQRWSSNYVQFAVDLKDDPLAGKSFSYGQQNFVKPNAGHWHF 390 Sodalis praecaptivus
P41783       326 VIQGALDDVEILRARQFVDSYYRTWGGRYVQFAIELKDDWLKGRSFQYGAEGYIKMSPGHWYF 388 Salmonella enterica subsp. enter...
Q7NVC0       325 VIAGALDDGELQRARQFVDAYYRQWGGRYVQFAIELKDDWLKGKSFKYGSQGYVKLNSGHWYF 387 Chromobacterium violaceum
Q63K19       356 EVASSFGDEELAALQNLMRSFGHKWGTRRVDFKIALRTDWLKGKSYREGGDGYVLLDHASWYF 418 Burkholderia pseudomallei
6RWX_S       304 SVREELTDEKLELINRLISEHKNIYGDQYIEFSVLLIDDDFKGKSYLNSKDSYVMLNDKHWFF 366 Shigella flexneri
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