7NMS


Conserved Protein Domain Family
Flg_new

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pfam09479: Flg_new (This model is not part of the current CDD release)
Listeria-Bacteroides repeat domain (List_Bact_rpt)
This model describes a conserved core region of about 43 residues which occurs in more than 400 mostly secreted or cell surface-located proteins from over 300 eubacterial and few archaeal species. These proteins contain between one and 34 copies of the domain that often occur in tandem arrays with up to more than 20 copies.
Statistics
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PSSM-Id: 518927
Aligned: 195 rows
Threshold Bit Score: 39.1455
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7NMS_A        293 YTVSYDVDG-E--VI---KT----K-----VEAGTRITAP--KPPT-KQGYVFKGWYTEKNGG-HEWNFNTDYMs--gND 351 Listeria monoc...
41_pfamImport   1 FTVSYDTQG-GnpIV---DN----S-----YTYGKAMKLP--V-PV-KEGFTFRGWYSDSAYK-KKVASITASTk---GD 59 
CDD46936      492 YIVKLETNG-G--KI---ADg---Kdv-tdYTCGTGAALPggGGIT-REGYTFEGWYEDSGFSgSPVTEI-SSTd--tGD 557
CDB94412      551 YQVTLNVND-G--TIgenVT----D-----YTYGTAVTLP--V-PT-KKGYKFEGWYDNAEFT-GVTVTEISAAa--tGD 611
46_pfamImport   1 YNVTLNTNG-G--VLa--NE----SdnitnYTQGTVVTLP--T-PT-QVGYKFEGWYENKDFTgNKVTMITA-Ds--eGD 64 
47_pfamImport   1 YTITFNTDG-G--VF---VEtpisS-----YIYGTTATLP--V-PT-KNGYKFEGWYDNAEFTgTALTEISDRAi---GD 62 
CDA12501      160 YNVYIDVDGnG--SV---SGd--gN-----YEKGKKASLT--ATP--DAGYKFDGWYDNKTG--ELVASGSKYTvnvnGD 221
52_pfamImport   1 YKLTYDPDG-G--TL---DEte-vS-----AKPGDKISLP--V-PV-RDGYTFEGWYLDKAHE-Q--LFGG-TMp--rED 58 
53_pfamImport   1 YNVTIDRND-G--SE---NI----T-----LEPVYEAKIE--YRPE-KMGYQFAGWYLDKELK-QEF--DG-TVp--aKD 56 
34_pfamImport   1 YQIRYVLNG-G--IC---EQ----Ste-qmITYGTPLKDIldALPVyRNGYSFADWYTDEALQ-AVYRPDT--Mp--aSD 64 
7NMS_A        352 FTLYAV 357 Listeria monocytogenes EGD-e
41_pfamImport  60 LQLYAK 65 
CDD46936      558 KTFYAK 563
CDB94412      612 KTYYAK 617
46_pfamImport  65 KVYYAK 70 
47_pfamImport  63 KVFYAK 68 
CDA12501      222 VNLTAK 227
52_pfamImport  59 CTVYAK 64 
53_pfamImport  57 LTLYAK 62 
34_pfamImport  65 LILYAK 70 
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