2VMC


Conserved Protein Domain Family
H_lectin

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pfam09458: H_lectin 
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H-type lectin domain
The H-type lectin domain is a unit of six beta chains, combined into a homo-hexamer. It is involved in self/non-self recognition of cells, through binding with carbohydrates. It is sometimes found in association with the F5_F8_type_C domain pfam00754.
Statistics
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PSSM-Id: 401422
View PSSM: pfam09458
Aligned: 165 rows
Threshold Bit Score: 38.3128
Threshold Setting Gi: 74853939
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2VMC_A   186 VRHVKFPVEF--LSVPIVSIGCKKVDAhtDNG-QMRWEGKSENITT--------KGFDLTFITWG--NNAVYDLTFDYV 251 Dictyostelium discoi...
CCZ13429 682 TAVITFAKPF--KDVPVVLASPHTYGT--ATn-VYPVSARVFDVTN--------KGFKIKLMRQAvgLTGFRDCQVSYL 747 Prevotella sp. CAG:1092
Q22LN9    39 TVSIEFKVQFapHVTPYVLISYSKFHF--SMAkINHYKATVVGVTN--------KGFSIIYETET--QNMEFGADVEWL 105 Tetrahymena thermoph...
A0CDA9    50 QTLVKFNKPF--KSTPTVILAPIKYDF--GDTlPQGFDIQLSAVNT--------VGFTITYVALS--PATIFGFDVSWA 114 Paramecium tetraurelia
A0DVF1    46 LKEFSFSGTF--EKPPQVAFVIYKYNY--DYYqPNGYDIEVTEITT--------TKFKVLLRCLY--QHRVWDTPFNWY 110 Paramecium tetraurelia
A0DHA2    37 IQEITFSETF--QETPVVYITLTKLSM---ASqKYGFEIDVTEVNT--------KGFKIIYKKYI--DDPI-TLQVQWL 99  Paramecium tetraurelia
A0DFV7    46 EYYISFSKQF--TQVPDVYLNIAKLDL--EYTfPQGYSLDIFNIST--------LGFTIRIVCES--PSRFYRVEFNWF 110 Paramecium tetraurelia
A0BFN8    48 eFFVPFAQEF--SSIPDVYLNIALMDM--ALQfPQGYSLDITSITTlgnmknldLGFTMKTVCES--PWLYFGINLNWF 120 Paramecium tetraurelia
A0DKA2    49 QSQVVFPRRF--SVRPQVLLMHQEIQW--SRGrNINYQTYVSDVTL--------FGFNINYIIWG--PAVIPILSVRWV 113 Paramecium tetraurelia
A0D656    49 yTQIVFPRRF--SARPQVLLMHEEIQW--SKGkNINYQTFVSDITI--------NGFYINYVIWG--PAIVPILTVRWI 113 Paramecium tetraurelia
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