Conserved Protein Domain Family
VMA21

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pfam09446: VMA21 (This model is not part of the current CDD release)
VMA21-like domain
This presumed short domain appears to contain two potential transmembrane helices. VMA21 is localised in the ER where it is needed as an accessory factor for assembly of the V0 component of the vacuolar ATPase.
Statistics
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PSSM-Id: 518907
Aligned: 45 rows
Threshold Bit Score: 39.8461
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_009154712  36 SVIYKLLGFTMAMIFFPIGSYFLSVNLVFGGkeiscpsapaVRYLHPdtsnsLGNATYAGAFAAIMANVVLVAYIIVA 113
XP_002073296 139 lIILMLLFYGSLIVLFPISVFFALKFIVLKN----------FFLITN-----MDIDIISVIGTVIAVHAAAGFYIYRV 201
Q9VCQ2       137 FIVLLLMSYCSLIIGFPIATFFALKFVVLKS----------Y---AH-----INADIISTICTVVAVHAAVGFYIYRA 196 fruit fly
XP_002048110  32 SAFKVVLFYCSLIVFLPVVTFFALKGFLLER----------FFTMSD-----MKVNIGSAVGAVAALHIALGVYIYRA 94 
XP_002026860  33 SSFKTVLFYCMLIVFLPVITFFLLKAVVLDG----------FFEMSE-----LKVNIFSAVGAVVALHIALGLYIYRA 95 
XP_001844545  20 rnfrVVFFYCILIILLPVSTFFATKYVLFDG----------YFQLSS-----VSSNIYAAVAAVIALHIALGLYIYRA 82 
XP_001607695  11 QVFKTVLMHCIVIIAFPVISFFVSKIFIFDG----------ILGLST-----VTSNVYAAGVAVLVLHVALAAFIYRA 73 
XP_003435718  21 RTFKTVFLYCILIIALPVLTFFTSKHWIFDQ----------LLQLSS-----VSSNIYSAVSAVVALHGALFLFIYKA 83 
Q9VCQ2        46 ERMQRLLLFLTVFLLFPVVIFVIFKFLIMEP----------LYGNSD-----DNVGIGSGVATVIVMHVLVTGYILRL 108 fruit fly
XP_001953952  46 RRMQQLIIFPTVFFLCPVLIFFIFKFALLAP----------FVGFDD-----ANAAIGSAVATVIVMHVLIAGYTLRL 108
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