5A5T


Conserved Protein Domain Family
eIF3_N

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pfam09440: eIF3_N 
eIF3 subunit 6 N terminal domain
This is the N terminal domain of subunit 6 translation initiation factor eIF3.
Statistics
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PSSM-Id: 401408
View PSSM: pfam09440
Aligned: 101 rows
Threshold Bit Score: 56.0023
Threshold Setting Gi: 134085068
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5A5T_E         5 DLTTRIAHFLDRHLVFPLLEFLSVKEIYNE--KELLQGKLDLLSDTNMVDFAMDVYKNLy-SDDIPH-ALREKRTTVVAQ 80 
A9UQS1         5 DLTQAICQNLDPHLILPLLDHCVDLDIYNE--ADLKRAKMQVLSRTRLIEQALELADA------TEKkDLDARMRSISEE 76  Monosiga brevic...
XP_004997713   5 DLTRQLCGFLDNHMTLALIQNALDKEIYKR--EQLITSKLKVLESAHFFDAMKEVYHDVka--tVPK-EVLEKEEAFNNH 79  Salpingoeca ros...
XP_006957955   5 DLTTRLIPFLDRHLALPLLNYLTDLDIYNQ--NQLQSAQYELVKGTNMVDYASQI---------NPHeSQDDKKKHIVDT 73  Wallemia mellic...
EOQ99945       6 DLTWHLLQFLDRHLSLPLVNHLTELGIYSQ--SDLVEAQYELVKNTNMVDYMESL---------KPGnTENPDKSHLIHK 74  Wallemia ichthy...
Q4PHN4         6 DLTQTLLPYLDRHLGLPLLSHLAGSGIFSE--TDIAKAQYELAKNTSMVDYALQLYEQAypNQPAPA-EIEKQRENAIAL 82  Ustilago maydis...
XP_018738811   5 DLTQKLLAYVDPHLGLRLLSHLSTKDLFDA--KDLAKAQYELAKHTSLVQDLPQFHQQAypGESVPE-VINQLKSQVEEK 81  Malassezia symp...
XP_001730299   5 DLTQTLLAYMDPHLGLPLLSHLRSLSIFDA--KDLAKAQYELGKKTNMVDYTMQFFREAypGEDEPK-DVAERANQLEAK 81  Malassezia glob...
EFC45156       4 sLALKIIPFLDVHLIFPLLEFLEQNEIYPK--QQVQLAAFELSKKTKMLNFQKEKQELVg---mTTTiDYQKEEKEIMDQ 78  Naegleria gruberi
CAM69469       2 DMLTKLLPYMDKHLALGLLNH------YAQngEDVQDAMMKLIETTGL----------------NADgSIKTETEEMMAK 59  Leishmania infa...
5A5T_E        81 LKQLQAETEPIVKMFed-pETTRQ-------MQSt---rDGRMLFD-YLA--DKHGFRQEYLDTLYRYAKF 137
A9UQS1        77 EKTWEKQLEPVFEMFen-dEVLSI-------I-------EATKNKDsLLSelEPYGFTENTADLLYHGSKF 132 Monosiga brevicollis
XP_004997713  80 VDSLSEELSKVYDVFsk-qEVIDA-------ISAsysnpDPAKLTE-KL---KEHGFEPKMLDTMFKAAra 138 Salpingoeca rosetta
XP_006957955  74 QQQYQQKAKEVLEVLtn-pDVSNH-------LTQ-----DKHKNRE-ILQ--EKFNLQPNSIEVLYDYGHF 128 Wallemia mellicola CBS 6...
EOQ99945      75 QEDFEATSAAIRRALed-qDIKSQ-------ISSh----DNTKNCE-ILT--SKFNLPVSSFEVLYEYGTF 130 Wallemia ichthyophaga EX...
Q4PHN4        83 NDKLGSEVDHVLEVIqd-pSVASA-------LKQ-----DKAQNLQ-WLE--EKYNLTSEQINALYRYGYF 137 Ustilago maydis 521
XP_018738811  82 REKLEKEAERVLAVVed-pNVASA-------LKQ-----DKTPKLA-WLQ--QHHQLTADQIQVLYQYGRF 136 Malassezia sympodialis A...
XP_001730299  82 NNHLAKEAEHVLTVIed-pNVAGA-------LKQ-----DKAQNLE-WLK--QQYKLTTDQINVLYEYGRF 136 Malassezia globosa CBS 7966
EFC45156      79 MQNYKQVCEPLLTKLkd-yNQNKD---------------NIKETLQvYLS--NDTRINHEMLDKLYDYAKF 131 Naegleria gruberi
CAM69469      60 ATAA---AQPALKEFfdesEDDHStyqfkltETEigerrTQGELSHeFLS--EKKGITAAVMNALYKLAYL 125 Leishmania infantum JPCM5
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