Conserved Protein Domain Family
RteC

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pfam09357: RteC 
RteC protein
Human colonic Bacteroides species harbor a family of large conjugative transposons, called tetracycline resistance (Tcr) elements. Activities of these elements are enhanced by pregrowth of bacteria in medium containing tetracycline, indicating that at least some Tcr element genes are regulated by tetracycline. An insertional disruption in the rteC gene abolished self-transfer of the Tcr element to Bacteroides recipients, indicating that the gene was essential for self-transfer.
Statistics
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PSSM-Id: 490310
Aligned: 40 rows
Threshold Bit Score: 218.217
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_008506184    64 FYKFEKPEYYALKIYHVALYTLLSQRPaGPPDILRKFYLEELEFILRYFNQHAFYYEYYRSGFTEMDEALFIPG-AVmAS 142 Mucilaginibac...
EHQ25479        59 FFKHIKPKFFALRIYYLEWYGIVTSIPaGDKEVLKAAYNEELKVIQRFFRLIAFYYQYYGLGATELDSLLFVRG-VEvQS 137
WP_008507992    63 FFKFTKPQFYAHYIFEVALFNLRSGLPgGDVEQLRAHYLDELRFIQRELRQHAFLYQYYRLGADDLDELYFVRG-VEvQS 141 Mucilaginibac...
EHQ29702        78 FFKVTKPRFFSLQILETELYHLENCRKaVTLDELRSYYGDELKSIGRFFNQYAFQYEYYRMKADELDGLCFVRG-AAlQS 156
WP_008504224    63 FFKYTKPSFYQWQIYYTELYTIETGFPfGNADKQLDYLAQELHYIERFFQQYAFLYQYYKLDADELDNLYFIRG-EEiQS 141 Mucilaginibac...
jgi:Solca_0201  64 FFKEIKPLFLKELIYFIEVFHLEVSKPiGSKDAQKTYFLQELDRIKLFFDRNNLLYTYYRMNKSHMDEVFFLRKgSRiPL 143
WP_015265200    61 FFKQVKPRFVSEQIYYGELYYMHSTIPiEPKEIA-QHFKRQLAFIRSYFQRHHFLYTYFRLDRNDLDEYLFRRNaPKvPF 139 Echinicola vi...
WP_015265767    61 FFKKAKPRIVAEQLYYGELYYIHSTLPvEKREVL-DHYRNQLSFIRSYFQRHHFLYTYYRLDRSDLDEYLFKRNaPKaPF 139 Echinicola vi...
WP_014771728    63 FFKLINPLLLKEAFYYAELFAVESNKPlGSNKKIRSYYSKAIRRIVKMLGKHKHLYNYVNLNESKFDHFYFLRNsENnLK 142 Belliella bal...
WP_051774894    60 FFKVTKQVPLIQIVYYTEIRNFELNLPkGSEITQQAYIHKKLTEIDQFFVRNIHFNQYVICGHTHSDKLYFTRSaADkIP 139 Formosa agari...
WP_008506184   143 PLLHDVPELDPDYSTNGDYLFSKFIAYEMLQEYILNELSALDCPvpgvgngimgatgMPAIAGKKWFEWTGELINVVELG 222 Mucilaginibac...
EHQ25479       138 VLIPEVPELDPEFATSCDYLFSKIRAFEQLQEFVLTRIRELDPAsip-------pevPTKRQPSEKLVWTGDKVNLVEII 210
WP_008507992   142 VLIPEVPELDKTFSTSGDYLFAKFKAFEMLQEHIAHALANIGKPert--------vyLRPGGRRQPLKWTGEQINAVELG 213 Mucilaginibac...
EHQ29702       157 MLVTDLPDNDPEFTTAWDYLFAKFRALEMLRDHILHLLEGLNGQgad-------lgfIRPGRKAVPLKWTGDTIHAVELG 229
WP_008504224   142 VLLPAVPEVNPGFATSGDYLFSKFMAFDKLKDWVIEKMLYLKQNpa---------npLQLNNEPDDMKWTGDTINLAEIG 212 Mucilaginibac...
jgi:Solca_0201 144 -LPEYSLDMDSNFSTVYSFKLAKVQAFEQLKEFINHSLNSLDAVe-----------qQPVKQKESLSTWTDSKAALIELA 211
WP_015265200   140 LPDKPFIQRDAPFSTLGSYRFSRFKAYSRLKEHLHQQIRTLKNP--------------ETATGKARLKWTAPKVALIELT 205 Echinicola vi...
WP_015265767   140 LAETIAIQKDSRFSTHGSYRFARFKAFTRLKEYLLGKIHHLQNP--------------APAPEKKRLKWTAPKVALIELT 205 Echinicola vi...
WP_014771728   143 QPTGELLYMDTKYVTLQSYNLGKIYAWIQVVEQLQEDILLLDGQq------------GISTSVKQGLTWTAPKVQLIELI 210 Belliella bal...
WP_051774894   140 YSCSDLYFRDPEFSTAYDMLLAKHQAFLLVVDHLKYKLTGNKSK----------------TPNIIPLKWTATKNALTELI 203 Formosa agari...
WP_008506184   223 YGIYLSKQLNDGKATLAEIFRWLNESFGLKIVNPANKLAEIKRRKRiSRTHFFDFLQAAFIAYLDEDD 290 Mucilaginibacter paludis
EHQ25479       211 YGLFFTGQFNNGNADIALIIRFMEEHFQVDLSRTYRDFMDIRNRKTtAITRFLEQMREAILAHIDDal 278
WP_008507992   214 YGLWVSEQLNGGEAALADIMYWLSESLDVDLSKHTTRFEEIKERKIlSPTRFFDGVRESVRRYIDDln 281 Mucilaginibacter paludis
EHQ29702       230 YSIWVSDQVNGGDAELADVMHWLSTTLDVDLSRYTRLFVEIKARKIlSKTKFLDLMKDAVMRYMNQGD 297
WP_008504224   213 IGIYHTKQLNNGTASLSDIFRWLEEKFRVKIGVPSKRLSELRRRKRlSRTRYLDEMKENVILKLDKDD 280 Mucilaginibacter paludis
jgi:Solca_0201 212 YALQSGGCVNFGKTDVKHIITNLERMFNIQLGNFYRVYQGMRIRKK-NRTIFLDNLKERLEKRMDDAD 278
WP_015265200   206 YALKAAGVFNNGQATIRDIATVVEKVFQQDMSQYYRTFQEIRIRKS-GRTHFLKRLTHALEKWMDNTD 272 Echinicola vietnamensis
WP_015265767   206 YALKAAGVFNNGQATIRDIATVVEQIFQQDMSQYYRTFQEIRIRKS-GRTYFLNRLTQALERWMDNTD 272 Echinicola vietnamensis
WP_014771728   211 YALKASGVFNNGNADIKQIANALGCLFDKKLTDYYRTFQEIRGRKK-SRTVFLDIMQERLVKWMEEge 277 Belliella baltica
WP_051774894   204 YGLHQSGALNNGNSTLKDIVHSFQIMFSCDLGNIYQKYAEMKYKNN-ELPTFLSMMTKRFLNNISDpe 270 Formosa agariphila
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