4NZG


Conserved Protein Domain Family
zf-H2C2

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pfam09337: zf-H2C2 
Click on image for an interactive view with Cn3D
His(2)-Cys(2) zinc finger
This domain binds to histone upstream activating sequence (UAS) elements that are found in histone gene promoters. Added to clan to resolve overlaps with PF16721 but neither are classic zf_C2H2 zinc-fingers.
Statistics
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PSSM-Id: 370444
View PSSM: pfam09337
Aligned: 24 rows
Threshold Bit Score: 48.8653
Threshold Setting Gi: 0
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4NZG_A         52 HQLTHLSFSKMKALLERShspYYMLNRDRTLKNITETCKACA 93  
1_pfamImport    1 HNNGHFGTQGIVDSVKRV---WIAPGITTIASKVCSSCSTCQ 39  
Q9YK99        853 HQLTHLSFSKTKALLERShspYYMLNRDRTLKNIIETCQACA 894  Murine leukemia virus
Q1KYL9       1386 HRLTHLGYQKMKALLDRGespYYMLNRDKTLQYVADSCTVCA 1427 house mouse
Q5PYI3       1381 HQLTHLSPRKMRALLDREespYHMLYRDKILHQVTESCTACA 1422 Murine leukemia virus
Q61530         57 HQLTHLSYQKMRALLDRKespYYMLNKDKILHEVAESCQACV 98   house mouse
Q85521       1426 HKLTHLSARKMKTLLEREetgFYLPNRDLHLRQVTESCRACA 1467 Feline leukemia virus
Q8UM96        794 HRLTHLGTKHLXQLVRTSp--YHVLRLPGVADSVVKHCVPCQ 833  Porcine endogenous retrovirus
AFM52260      600 HYLTHLGAKKLKDLVRSSg--YYIIGLADLAGEVVKGCKACA 639  Megaderma lyra retrovirus
P03360        807 HRATHLGESKLTELVRKH---YLICGIYRAARDITTRCVACA 845  Reticuloendotheliosis virus
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