1XWI


Conserved Protein Domain Family
Vps4_C

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pfam09336: Vps4_C (This model is not part of the current CDD release)
Vps4 C terminal oligomerisation domain
This domain is found at the C terminal of ATPase proteins involved in vacuolar sorting. It forms an alpha helix structure and is required for oligomerisation.
Statistics
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PSSM-Id: 518836
Aligned: 116 rows
Threshold Bit Score: 62.1329
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1XWI_A       259 LTPCSPGDPGAIEMTWMD--VPGDKLLEP-VVSMSDMLRSLSNTKPTVNEHDLLKLKKFTEDFG 319 human
XP_001584262 380 veaCAPNAPGARKWSLRDpdFPADKIESP-PVKFEDFKEAICKIHPTVSPAELVKYQTWTNEFG 442
XP_001581179 366 fFPCPENTPGCVKMNLHDpnFPIDKVPVP-PITFEDFKDAMHKAKSSVSPKDIQQFEEWTALFG 428
XP_004995127 362 WRPCDEEEPGALRGNVQD--IPAEDAVAR-SVRSGDVAKAIARNPRTVSSEELARFLAYnqh-- 420
Q24F69       348 YTPCLQSDEDAEEINLYQ--LDPKQIILR-KAEIKDFKESIKNCKPTVSKKFLDYYNKFLEKCG 408 Tetrahymena thermophila SB210
Q240K0       425 YVACAPSDPQGESKVLMD--IQ-GSMLKLqDVSIDHFELALQSCKPSVSEKDIERQIEFTKEFG 485 Tetrahymena thermophila SB210
XP_002671571 167 IVPCSRNEKNSKKMNMLD--IKQPEKLKIaKVTAKDIYDSIKSVKPSTNPSEILSFIEFTQNYG 228
A0C9T3       361 YMVCSLNDPEAEEMTLMD--IPSGQLLLNeNISYSDFLAVLPNLKRDITQQQLMEYKNWTDQFG 422 Paramecium tetraurelia
A0DGV4       370 YTVCSASDPQAEKITMKS--IEKGQIFVP-EILYDDFLAVLPKCKPSVSKGDLEKYEDWTQQFG 430 Paramecium tetraurelia
A0C4V5       402 YMACSPSDPEGQQMRMYD--IKGGQLYLP-HIEYDDFLSVLPKCRPSVSQGDLKKYEDWTSEFG 462 Paramecium tetraurelia
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