Conserved Protein Domain Family
ATG2-VPS13_C

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pfam09333: ATG2-VPS13_C (This model is not part of the current CDD release)
Autophagy-related protein C terminal domain
ATG2 (also known as Apg2) is a peripheral membrane protein. It functions in both cytoplasm-to-vacuole targeting and in autophagy.
Statistics
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PSSM-Id: 490290
Aligned: 94 rows
Threshold Bit Score: 70.2315
Created: 21-Aug-2024
Updated: 4-Feb-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_012190673 1977 VSRYASKPEDMTQALSQAYSGLTEGLTSAAQTILAIPMEVYDPsdargasgGGGAARGAgsgrgPVVKAVPIAILKGAQG 2056
XP_014327053 1908 RPRRAAQPADLREGVAKAYDTVREGVIDTAQTLCDVASRGHEQ--------KGLPGAVG-----GVLRQIPPTVVRPLIV 1974
EGW10712      354 KLRRGQQPADLREGMAKAYDAVREGILDTAQTICDVASRGHEQ--------KGLTGAVG-----GVIRQLPPTVVKPIIL 420 
XP_001625843  795 RHRLARQPADLREGVANAYNVVTKGLNRTASNIAKVARDEHEE--------KGMTGAVG-----GVLRQVPATMVQPLIL 861 
OWR43991     1126 RRDRTRQPADIREGVTSAYNTVKEGFAETAASLSAAARR---G--------KG-----A-----GVLRQLPGAAVAPLAL 1184
5_pfamImport    1 RHNKRSHPADIREGVATAVMLVKEGLGETAQTIVRVASEEHEI--------KGTAGMVG-----GVMRQIPPTALTPIIL 67  
XP_002427653 1923 KTKRYSQPADIREGMAIAYLVVKEGIGETAKTIVRVASEEHEQ--------KGVTGAVG-----GVLRQIPPTVVKPIIL 1989
XP_046441213 1963 RRRRQVQPVDIRDGVAKAYQVVREGLGETAQTLVRVANEEAEQ--------KGMTGAVG-----GVLRQIPPIVVKPIIL 2029
XP_008199971 1931 RRKRYSQPKDIREGVTNAYKLVKEGIEETADNILQVASHEHEQ--------KGYSGAVG-----GVIRQIPPTIIKPIII 1997
EDX08983      139 KRRRQGRPKDLREGVANAYTIVREGINESANTLIEAAITEHDQ--------KGYSGAVG-----AVVRQIPQLVVCPAVL 205 
XP_012190673 2057 ATQAIAKTMQGVQVTLgDLENVK--EGKYK 2084
XP_014327053 1975 ASEATSNLLGGMRNQI-KPDARKedFLKWR 2003
EGW10712      421 ATEATSNVLGGMRNQI-LPDAHKdhALKWR 449 
XP_001625843  862 ATEATSNVIGGVRNQI-LPDARReaVEKWR 890 
OWR43991     1185 AAAGAADVLGGVRAHL-APHTTRdhADKWR 1213
5_pfamImport   68 ASQATCNVLQGVRCQL-APDARVeaMQKWR 96  
XP_002427653 1990 ATEATNNVIGGVRSQL-VPDARKeaVEKWR 2018
XP_046441213 2030 ATEATFNVIGGVQSQL-MPDTRKeaSDKWR 2058
XP_008199971 1998 ASEATNNVLGGMRCQL-VPDARKeaNEKWR 2026
EDX08983      206 ATQATTNILGGAKSSL-VPEAKLeaRDKWK 234 
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