Conserved Protein Domain Family
Rab5-bind

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pfam09311: Rab5-bind (This model is not part of the current CDD release)
Rabaptin-like protein
Members of this family are predominantly found in Rabaptin and allow for binding to the GTPase Rab5. This interaction is necessary and sufficient for Rab5-dependent recruitment of Rabaptin5 to early endosomal membranes.
Statistics
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PSSM-Id: 518820
Aligned: 4 rows
Threshold Bit Score: 355.429
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_012812295 524 CDMCSNYEKQLQGIQTQEAEIRDQVKKLQSMLRQVNDQLEKTLKDKKDLEDYMKQNTEETSTQISTLTIRTNQSETLLAD 603
O35550       533 CDMCSNYEKQLQGIQIQEAETRDQVKKLQLMLRQANDQLEKTMKEKQELEDFLRQSAEDSSHQISALVLRAQASEVLLEE 612 Norway rat
Q19088        37 CEMCQNYEVNLTALQENERKLKEEVKAAMELNERYQLDLSNERDYRKELEKKMNELSTNCLNQVNEAAKANAKSEQRLDE 116 Caenorhabditis ...
XP_003971004 528 CDMCSNYEKQLQAIQGQEAETRDQVKKLQVMLRQANEQLERTMTDKQNLEDSVQAGNKETAAKVSTLLHRVQESETLLSS 607 torafugu
XP_012812295 604 LQQAFTQAKRNIQDQMAVLMHSREQVSEELLRLQRDNESLQGKHSLHVSLQQAENFSLPETSEELQNLVLKYREDIISVR 683
O35550       613 LQQSFSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLHVSLQLAEDFILPDTVQVLRELVLKYRENIVHVR 692 Norway rat
Q19088       117 LSAKHDKSIEVFTDQLNLARDKLQQADDDFVTLGKKYKKLLGSTRKSAQELRSEKIDMPADLDQLQFICLKNREELIETR 196 Caenorhabditis ...
XP_003971004 608 LQLAFSEAKRNTQENLMVLVKSREQVADELNRLQRDNESLQGKHKLHVELQQQEGFQMPDNVQELQELVVQLRDHLVALR 687 torafugu
XP_012812295 684 TAADHLEEKLKAEILFLKEQIQAEQCQKENIEETLQIEIENCKEEIdileASTSSLKLELDRVKAEREQLEASLQEKTRA 763
O35550       693 TAADHMEEKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEI----ASISSLKAELERIKVEKGQLESTLREKSQQ 768 Norway rat
Q19088       197 AAKEHTEQQLQDEITVLRAQILEERAHREDQEVTFTAEISRLQSEL----GKINTRMVVASETIADQDS-------NIRQ 265 Caenorhabditis ...
XP_003971004 688 TSFDHMEEKLKAEILFLKEQIQAEQCLKENLEDTLQVEIEGYKEEI----ASFSRLKTELEQIRVEKEQLQNGVTEKAEL 763 torafugu
XP_012812295 764 LQNLQTLKDSLEDQLKKETGGKASLEQLVFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQTD 834
O35550       769 LESLQEIKVNLEEQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQAD 839 Norway rat
Q19088       266 IRDLQTTVGELETQVQQVQNERAAVEQTAQNYKQRCTSLQQELDTSEVVQRDFVKLSQSLQIQLEKIRQSE 336 Caenorhabditis elegans
XP_003971004 764 LEKLQSMKISLEQQLKDLSDTKAALEAQVVDEKAKAQRLQTELDVSEQVQKDFVKLSQTLQVQLERIRQAD 834 torafugu
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