Conserved Protein Domain Family

pfam09282: Mago-bind 
Mago binding
Members of this family adopt a structure consisting of a small globular all-beta-domain, with a three-stranded beta-sheet and a contiguous beta-hairpin. They bind to Mago alpha-helices via extensive electrostatic interactions and at a beta2-beta3 loop via hydrophobic interactions.
PSSM-Id: 401281
View PSSM: pfam09282
Aligned: 48 rows
Threshold Bit Score: 45.1255
Threshold Setting Gi: 74635799
Created: 21-May-2020
Updated: 7-Aug-2020
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
Format: Row Display: Color Bits: Type Selection:
XP_011276933  18 GDGIIGGTVRADGSVRKTLKVRPGFTP 44  Wickerhamomyces ciferrii
XP_003286742   3 nhTVIKGTQRADGTWRKDIKVKEGFVP 29  Dictyostelium purpureum
XP_015787262  11 GSTIIPSSQRPDGSWRKPRRVKEGFVP 37  two-spotted spider mite
XP_008196205  11 GDTFIPASQRPDGTWRKARRVKEGYVP 37  red flour beetle
Q22615        27 GETFITATQRADGTWRKARRVKGGYIP 53  Caenorhabditis elegans
XP_004988981   5 kpTFIPATQRPDGTWRKPRRVRPGYIP 31  Salpingoeca rosetta
OWR45379      12 GAKFIPATQRPDGTWRKPRRIKDGYVP 38  Danaus plexippus plexippus
Q4UB65        36 GEKYITPTKRPDGTFRKEIKIRPGYVP 62  Theileria annulata
XP_002967199   9 eERILPATRRPDGTMRKAVRIRAGYVA 35  Selaginella moellendorffii
XP_029520840  10 SGKYIAATQRPDGTWRKPRRVKDGYTP 36  sockeye salmon
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