6JAT


Conserved Protein Domain Family
Rubis-subs-bind

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pfam09273: Rubis-subs-bind (This model is not part of the current CDD release)
Rubisco LSMT substrate-binding
Members of this family adopt a multihelical structure, with an irregular array of long and short alpha-helices. They allow binding of the protein to substrate, such as the N-terminal tails of histones H3 and H4 and the large subunit of the Rubisco holoenzyme complex.
Statistics
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PSSM-Id: 518794
Aligned: 112 rows
Threshold Bit Score: 39.7026
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6JAT_A       345 SKSDRLYAMKAEVLAragiptss-vfalhftePPISAQLL-AFLRVFCM---------TEEELKEHLLG-DSAid----- 407  human
XP_031805814 305 EAETRLLGERWDFLCqlemvgeegafvigreeVITEEELS-ATLKVLCMpa------kEFRQLKKRDSW-EEDgens--- 373 
XP_040017506 307 GLEQQLVEEKQEVLCqvmrgkea--fvfgkqgCLTDFELH-SALKVLCMse------eEFSEFKDNEGW-EEDededi-- 374 
Q803K4       308 EANQQLLEDKWKMLCemevvgekgvfifgqsgSLTYHELY-TTLKVLCMss------qIFEDFRENEGW-EEDdeddddk 379  zebrafish
XP_006004681 309 EAERKFVTEKWDLLCklemvgeegafviglteVLTEEELF-TTLKVLTMsa------eEFEDYKENEDW-EEVeddee-- 378 
Q9CWY3       329 ETEKLLVCERWDFLCkqemvgeegafvigceeVLTEEELA-TTLKVLCMpa------eEFRDYKERAGW-GEEeted--- 397  house mouse
XP_038041215 292 EAQRQLVSEQWDFLCqlemvgeegafvvgwdeVLTEEELS-VTLKVLCMse------eEFKEYKEQDGW-EDDseeee-- 361 
XP_004347919 556 GSRRYLFDDKKKLLKhnncled----aydlcdPGHGRKLLsAVLTVCLM---------NDRTFTALVNNvGYDagqes-- 620 
XP_002897607 213 LEDSGILASKLHILSrirvddap-qvcisragNVEDSDLVrVYTALYNMnaeqvracdNARAFSECFPS----------- 280 
XP_046755327 174 eAQQQLVAEQWDFLCqlemvgeegafvlgwdeVLTEEELS-VTLKVLCMse------eEFKEYKEQDGW-EDDseeee-- 243  chicken
6JAT_A       408 ----riFTlgnsefPVSWDNE----------VKLWTFLEDRASLLLKTYKTTI---EEDKSVLKNHdl----svRAKMAI 466  human
XP_031805814 374 --liltNK------TIPKLK-----------ASWKVLLRNSTLLTLQAYATDL---KSDQELLHNKearaklswKEEQAL 431 
XP_040017506 375 -slsfsNE------GLSGLK-----------ASWKWLIHGAARLTLRSYGEEApggKSDQELMEDRvafaglssRRRNAL 436 
Q803K4       380 meqdlsFE------GLASLS-----------VEWKRLLCVAATETLDSYNEDV---ETDRRLMEDQralaelssRERRAL 439  zebrafish
XP_006004681 379 --vssmTD------EIHKLK-----------LPWKQLLHSSAELTLASYKTDL---KADEHLITNPeaysklsqREQTSL 436 
Q9CWY3       398 --dslaIT------DIPKLQ-----------ESWKRLLRNSVLLTLQTYTTDL---KTDQDLLSNKeayatlswREQQAL 455  house mouse
XP_038041215 362 -sstlsNE------ALSRLK-----------PPCKKLLYDSVLLTLESYRSDL---KADQDLLKKEayek-lsqREQQAL 419 
XP_004347919 621 -ilvlgRS------RFPSNP-----------PQVMAAMAFLCEAKLQSYTSSL---VEDLEALEQPal----dpVTRVVR 675 
XP_002897607 281 --------------------ElmpdldtelgYHELSLLLKSIKLQLEKYATTL---EEDQTILQHLtdv--tvsGNKHAV 335 
XP_046755327 244 -nstlsNA------ALSRLK-----------APCKALLYDSVLLTLESYRSDL---RAEQDLLSKQvyek-lsrREQQAL 301  chicken
6JAT_A       467 KLRLGEKEIL 476  human
XP_031805814 432 QVRYGQKRIL 441 
XP_040017506 437 QVRCGQKSIL 446 
Q803K4       440 YVRLGQKNIL 449  zebrafish
XP_006004681 437 QVRYGQKKIL 446 
Q9CWY3       456 QVRYGQKMIL 465  house mouse
XP_038041215 420 HVRYGQKRIL 429 
XP_004347919 676 QLCAEEKRVV 685 
XP_002897607 336 TFRLSRKQIL 345 
XP_046755327 302 HVRYGQKRIL 311  chicken
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