1VCC


Conserved Protein Domain Family
VirDNA-topo-I_N

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pfam09266: VirDNA-topo-I_N 
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Viral DNA topoisomerase I, N-terminal
Members of this family are predominantly found in viral DNA topoisomerase, and assume a beta(2)-alpha-beta-alpha-beta(2) fold, with a left-handed crossover between strands beta2 and beta3.
Statistics
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PSSM-Id: 286365
Aligned: 11 rows
Threshold Bit Score: 64.7246
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1VCC_A   4 LFYKDGKLFTDNNFLNPVSDDNPAYEVLQHVKIPTHLTDVVVYEQTWEEALTRLIFVG 61  Vaccinia virus WR
Q070E5   5 LFYLEGVLYYDADRTRRVEDSNPTYDVVARVKIPAHLTDVAFVEQTLEESARGLIFIG 62  Crocodilepox virus
Q6TVQ8   4 LHLSDGKLFFDKELTQPVPDDNPAYAVLAKIRIPPHLSDVVVYEQDLESAQQGLIFVG 61  Orf virus
Q9J587   7 FHYKDDKLYYDAAYKNLVPASNKTYEIIKAYRVPPHLKEVIVYEQSLEEASNSLIFIG 64  Fowlpox virus
P87507  16 IYNTDGQEIVDDNLLN----------IIKKYKPPKHLNNIELIAKNIEEADNGIIYIG 63  Amsacta moorei entomopoxvirus
Q08FR6   4 fSYKDGKLFFDKEFKHIVPYDNKTYEILRHVKIPPHLTDVIIYEQSYEQSLTGLIFVG 61  Deerpox virus W-848-83
Q8V3M1   4 FLYYDGKLFFDTDLTKQVPYDNPTYDILKYIKIPNHLTNVMVYEQTYEQSLHRLIFVG 61  Swinepox virus
P16472   4 FTYKDGKLYEDKELTIPVHCSNPTYEILKHVKIPSHLTDVIVYEQTYEQSLSRLIFVG 61  Rabbit fibroma virus (strain Kasza)
P68698   4 LFYKDGKLFTDNNFLNPVSDDNPAYEVLQHVKIPTHLTDVVVYEQTWEEALTRLIFVG 61  Vaccinia virus WR
Q6TUT8   4 LYYNDGKLFEDKELTMSVSSDNPAYEILKKIKIPSYLTDVVVYEQTYDESLNRLIFVG 61  Yaba monkey tumor virus
Q98254   5 FFYKDGELFHDRKCTRRVSRSNATYEVLRHVRIPAHLHDVRVLEQTYEQAQRGLVFVG 62  Molluscum contagiosum virus subtype 1
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