1WLF


Conserved Protein Domain Family
PEX-1N

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pfam09262: PEX-1N (This model is not part of the current CDD release)
Peroxisome biogenesis factor 1, N-terminal
Members of this family adopt a double psi beta-barrel fold, similar in structure to the Cdc48 N-terminal domain. It has been suggested that this domain may be involved in interactions with ubiquitin, ubiquitin-like protein modifiers, or ubiquitin-like domains, such as Ubx. Furthermore, the domain may possess a putative adaptor or substrate binding site, allowing for peroxisomal biogenesis, membrane fusion and protein translocation.
Statistics
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PSSM-Id: 518787
Aligned: 96 rows
Threshold Bit Score: 82.5425
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1WLF_A        102 QQVEVEPLSADDWEILELHAISLEQHLLDQIRIVFPKAVVPIWVDQQTYIFIQIVTL-----MP-A-APYGRLETNTKLL 174  house mouse
XP_002682630  107 KSVFVRPETIDDSEILEFNQNSIEEELLSQVRIAYRDMKFPLFINNNISITLNTYQCgn----ddKdTNVYIIDSGTELI 182 
Q4Q2J2        101 TKVLVAPLTVDDSEVVEQNALRVENLLLRQVQVVFPSMIISVSIFPGVPAKVVVTAIecgdaEEkLrSGCATMHEGTHFV 180  Leishmania major
Q4DTV3        100 SRVLVSPASVDESEVAEQNALRIETQLLRQVQVIFPGMTISVVVFSDVHARVVVQRIedsqgRE-LsSGCAVMSEGTEFV 178  Trypanosoma c...
NP_510386     103 SHIEVAPRTEDDYSVIAQSQSSIENEFLNQIRLVSQNMIIPHFLSPGVYVQFRILNIvpasnKP------VMLNNDTELH 176 
XP_049544187   92 KRVEVSAVTEKDWEMLELSSNRIQSILLDQTRIVTKGQNLVVWINDSISIKIRIKFT-----IPt--LPFGRLENDTELV 164 
XP_001956437   93 RSVHVTPVSSKDWEIIELSTEKISGSVLEQTRIVNSSQILIVWINKSMQVALTVDRL-----KPh--MNYGRIDHNTELV 165 
XP_001813222   89 QSVTITAVDSNDHLVLESLAENVQSTLLEQIRVLTNGQKFVIWIGATIHVTVTVCDI-----KP---ISPGKIDNLTEVV 160 
EFN74069       58 SSIKIAPRTTNDRELLELQMERVQSNLLSQVRIVAKGQPIVAWISKFSSVTFIVEDS-----EPk--FAYGSLQQFTEVH 130 
1_pfamImport    1 ERVFVTPVTNADWDLLMLNNVSLQDRILQQLQIVHKNRIFPIWVSKFVHLKICIDDLe-------NgLQVGSLKDSTEIV 73  
1WLF_A        175 IQP 177  house mouse
XP_002682630  183 VET 185 
Q4Q2J2        181 IAT 183  Leishmania major
Q4DTV3        179 IAT 181  Trypanosoma cruzi
NP_510386     177 VQT 179 
XP_049544187  165 VEP 167 
XP_001956437  166 VAP 168 
XP_001813222  161 IIA 163 
EFN74069      131 VLD 133 
1_pfamImport   74 VKP 76  
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