6MZD


Conserved Protein Domain Family
TBP-binding

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pfam09247: TBP-binding (This model is not part of the current CDD release)
TATA box-binding protein binding
Members of this family adopt a structure consisting of three alpha helices and a beta-hairpin. They bind to TATA box-binding protein (TBP), inhibiting TBP interaction with the TATA element, thereby resulting in shutting down of gene transcription.
Statistics
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PSSM-Id: 518777
Aligned: 14 rows
Threshold Bit Score: 54.5866
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6MZD_A          7 DEDSAGg---GPFSLAGFLFGNINGAGQLEGEsV--------LDDECKKHLAGLGALGLGSLITELTANEE 66   human
XP_007649802   28 EDSSGG----GPFSLTGFLFGNINGAGQLEGEsV--------LDDECKKHLAGLGALGLGSLITELTANEE 86  
EEC16643       12 SDEDGE----PDLVLTGFLFGNIDKHGRLEND-F--------LDPESKRNLHQLNHLGIGRMWEEITGDAE 69  
XP_011146890    4 SEEENEkdlaSGLNITGFLFGNIDDNGQLEDD-I--------LDPEAKQQLASLSRLGLSSFISEMIQNES 65  
3_pfamImport    2 NDSDKNe---GGLNLAGFLFGNVDEHGNLDGD-F--------LDEEAKQQLSSLSRMGLSSFLSAMLHDDD 60  
Q7QK07          7 SDNENE----GGLNLAGFLFGNVDENGHLDGD-F--------LDEEAKQQLSSLSRMGLSSFLADVLQDDD 64   Anopheles gambiae str....
EDW34083       13 SIGNGGg--dFGMDLTGILFGNIDSDGRLLADdErg----qgFDAELRENLGSLAKMGLNSLLHEVIDTKD 77  
XP_008191418    4 SDDENFnrdeDCVDLTGFLFGNINEQGQLESD-V--------LDTESQKQLSNLGKLGLGSTLKEMIGvds 65  
XP_032518850    6 DPNENGr---SGMDLTGFLFGNIDESGQLEDNgI--------LDDESKRMLSSLNRLGLGSIISEVLDEND 65  
XP_002038592    8 SDDEGSi--gNGLDLTGILFGNIDSEGRLLQDdDgegrggtgFDAELRENIGSLSKLGLDSMLLEVIDRKE 76  
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