1V0D


Conserved Protein Domain Family
DFF40

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pfam09230: DFF40 (This model is not part of the current CDD release)
DNA fragmentation factor 40 kDa
Members of this family of eukaryotic apoptotic proteins induce DNA fragmentation and chromatin condensation during apoptosis.
Statistics
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PSSM-Id: 518767
Aligned: 20 rows
Threshold Bit Score: 305.397
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1V0D_A       103 IQAARQQLSd---EQAPLRQKLLADLLHHVSQ------NITA---ETREQDPSWFEGLESRFRNKSGYLRYSCESRIRGY 170 house mouse
EDO49838      56 VDQIRDLMTg---DESSEMYSVMAAFLNQLQE------NIEA---ETKEDDPLWFEGVSASFQTKEDAMKASAQSRIRNY 123
XP_002435479  91 TRLLASRSNevvaALEPYKGQLIEQMLGNIESlevpehVLLA---DNKDQDPKWFEG-EKRATSKRKVMRERAKTRIKGY 166
1_pfamImport   1 SIKIKSFMD----ENIKEKIRILSSVLDVDDE------SKKKkisSLRLRDPDWFQGLETRARTKEEFMFKRCQERIRSY 70 
XP_002057690 148 PDKFRRMIT----EYEQQKQRRALDNTKAH-----------L---SLKAEHLEWFEGSEERFQSKEEAMAMRAQTRVRGY 209
XP_002065139 149 PDKFRRMIT----QYELQKQRRMLDNTKAH-----------L---SLREEHMEWFKGGEERFHSKEEAMSMRAQTRVRGY 210
XP_007236742 107 ISAAKRLLTddgeELPAKRRKLLGDLLNNLTD------SAEL---ENRTQDQDWFQGIDSRFKTKSAYMRFNCEQRIRGY 177
XP_040049298 103 VEAAKGLLSd---EPSPKRRKILTDLLHNLQD------TSEV---EKREDDEDWFTGVDTRFKTKSAYMKFNCGSRIRSY 170
5_pfamImport   1 IEAAKGLLSd---EKSSKRRKILTDLLQNLED------RSEL---ESREEDEGWFQGVDSRFKTKSAYMKYNCESRIRGY 68 
4_pfamImport   1 VKAAEDLLRd---ERSPKSRKVLSDLLLNLED------RSEL---ETRDQDADWFRGVGPWFKTKSDYMKHSCRSRIRGY 68 
1V0D_A       171 LREVSAYTSMV-----DEAAQEEYLRVLGSMCQKLKSVQYNGSYFDRG-------------------------------- 213 house mouse
EDO49838     124 FSTAKEYIEKEg----SKRSKPLLLAALSNFQQQLKKDHYFGSYFVRS-------------------------------- 167
XP_002435479 167 FYKSKEDLQKCv----SENGKQCLSQLFEEFSALLRAGDHNGHYFVRG-------------------------------- 210
1_pfamImport  71 MYKTKSDMIKSdfyikQTKCRKYLDEVFKQFSELLTKNKHHGYYFDRS-------------------------------- 118
XP_002057690 210 YYKTKEELTRNqlyrqNAKARQVINSVLDQFRYLLIGCDYFSMIFNRKcqlkhemlqqqvgveqpdagn--vpnkrlrqi 287
XP_002065139 211 YYKTKEELTRNplyrqNAKARQVINSVLEQFRYLLIGCDYFSMMFDRKcqqkheflshqlqqeeeetdgaasvpkrlrql 290
XP_007236742 178 LKEVDGHAQSIv----SVREREKYKKLVVNLVERLKSDRYNGRYFDRT-------------------------------- 221
XP_040049298 171 MKELDAATKTIq----RAAVRAEFLKTTKCLAEMLRSAKHNGSYFDRT-------------------------------- 214
5_pfamImport  69 LKELDDATKSIq----KAKVRAEFLKTSQSLTEMLKTAKYNGCYFDRT-------------------------------- 112
4_pfamImport  69 TREVKS-SKSIk----KAKVRKEFQKASESLEEMLKEAKYNGCYFDRS-------------------------------- 111
1V0D_A       214 -----------AEASSRLCTPEGWFSCQGPF--DLESCLS----KHSINPYGNRESRILFSTWNLDHIIEKKRTVVPTLA 276 house mouse
EDO49838     168 -----------ACESQRLCCSDGWFNCMGKF--DSSHCTK----LHKINPYGSKEGRVLFSTWNLDHVIEKSREILPSMV 230
XP_002435479 211 -------------EKEALCCEKGQFLCQGTF--SKPSCDSr---VHRINPYGSREQLVCFSTWNLDHRVERSRSILPAIG 272
1_pfamImport 119 -----------NTNG--LCDEIGTFKCEGAW--NQSVCSYergtGHKINPYQSRESRIIFSTWNLDHWVERSRTIIPALF 183
XP_002057690 288 ikdytsrhailDEWSVSLCTDLGDFYCQGAYsdNGNNCSL----RHTINPYASRENLILFQVWNLDHQIELCRSILPALV 363
XP_002065139 291 ikdytkrnnilDKWSVSLCSNLGDFYCQGSYsdNGNCCSR----QHSINPYASRENLILFQVWNLDHQIELCRSILPSLV 366
XP_007236742 222 -----------EQQQHRLCTDDGWFTCQGAF--DEQNCES----LHSINPYGNRESRILFSTWNLDHRIEKKRAVLPALV 284
XP_040049298 215 -----------EKEAHRLCTAAGWFTCQGSF--DQEVCRS----FHSINPYGSRESRILFSTWNLDHRIEKKRTIIPALL 277
5_pfamImport 113 -----------EKQPDRLCTQEGWFTCQGSF--DEKVCKS----LHSINPYGSREGRIVFSTWNLDHRIEKKRTVIPALL 175
4_pfamImport 112 -----------AEEEERLCTPEGWFTCQGSF--DQEACSF----FHSINPYSSYESRIVFSTWNLDHRIEKRRTVIPTLL 174
1V0D_A       277 EAI---------------QDGREVNWEYFYSLLFTAENLKLVHIACHKKTTH------KLECDRSRIYR 324 house mouse
EDO49838     231 KAAee------------cPKGKQLNWKYFYSLLFTCVNLKLVHITCHFKGEHe-----GQVCSTKQFYE 282
XP_002435479 273 KAIe-------------eANGRILNARYFYKLLFTTDNLKLVHPVCHIKSEHg-----GFKCERAHWYV 323
1_pfamImport 184 EASkm-----------asEVHRSINMNYFYELLFTTVNLKLVHIVCHDKGQHi-----SAKCDPNLYLQ 236
XP_002057690 364 ANVkelvsqpqkkcalhnKRIVDISVLEYFLEIFSLKNLKLVHIVCHEKVQRtnhsngRLLCGDCHEYR 432
XP_002065139 367 ANVeklitqpqlkctlhhKRVIDISVLEYFLEIFSLKNLKLVHITCHEKTQRtnnsngRLVCSECHEYC 435
XP_007236742 285 ETLh-------------gQKISSINLDYFYRLLFTRTNLKLVHIVCHKKGAH------NLSCDPCQLYN 334
XP_040049298 278 EALq-------------sHKSAEVNLHYFYRLLFTRDNLKLVHIVCHKKEAH------HLQCDANEIFN 327
5_pfamImport 176 EALq-------------nHRSTDINLNYFYQLLFTRENLKLVHIVCHKKGSH------NLQCDTKKIYN 225
4_pfamImport 175 GAVe-------------rHGQARVDLGYFYQLLFTTRNLKLVHIVCHKKEAH------NLACDGRKLLR 224
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