3N8T


Conserved Protein Domain Family
BE_C

?
pfam09210: BE_C (This model is not part of the current CDD release)
1,4-alpha-glucan branching enzyme, C-terminal
This entry represents the C-terminal domain found in bacterial 1,4-alpha-glucan branching enzymes, such as TTHA1902 from Thermus thermophilus and TK1436 from Thermococcus kodakarensis, which belong to the glycoside hydrolase family 57 (GH57). These enzymes catalyze the formation of branch points in alpha-glucans by cleavage of an alpha-1,4 glycosidic bond and subsequent transfer of the cleaved-off oligosaccharide to a new alpha-1,6 position. This is an alpha-helical domain composed of a four alpha-helical bundle. It plays a role in the formation of the active-site cleft, being essential for substrate binding and catalysis.
Statistics
?
PSSM-Id: 518756
Aligned: 103 rows
Threshold Bit Score: 57.1864
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
3N8T_A        430 RAEDRMVAIVSRFR--GRD-----ELTN-RVIEQLARELLILEASDWQFLITTGQAKEYAKRRVLIHSRDFHRLANELvr 501 Thermococcus k...
Q7VBG0        420 KAGRAMIEICNVGV--EKK-----S--DlRVIQQAARELLLSQSSDWSFILRAGTTTELAKERINRHLKRFWSLIESL-- 488 Prochlorococcu...
WP_011933490  421 RAGRAMVERCSRGV--GTE-----A--DlRLLHQAGRELLLAQSSDWSFILRAGTTTELAKERIERHLARFWRLMAAI-- 489 Synechococcus ...
Q7V6N1        420 RAGKAMVERCSLGV--ARE-----S--DlRLLQQAARELLLAQSSDWSFILRAGTTTELAKERIHRHLNRFWQLMQAI-- 488 Prochlorococcu...
Q46K00        420 KAGRAMVTICSDSL--IKE-----S--NiKIINQAGRELLLCQSSDWSFIIKAGTTTELARERINLHLKRFWMLINTI-- 488 Prochlorococcu...
AHC24972      413 eVVDTALAAVDKAM--MHPd---aGGRD-VVADQILRETLLTVSSDWPFMVSKDSAAEYARYRAHLHAHATREISAAL-- 484
jgi:Srot_1401 419 dvaetALRTVDKRL--AGTq----LFRD-RVSDQILRETLLTVASDWAFLVSKDTAAQYARDRAHLHAHAVREIAQAA-- 489
1_pfamImport    1 -----MVEANAALQrrLLAlpvndAVRD-PVADQAVTEALLALSSDWAFMVTKDSAADYARRRAREHTERFDRLAEAL-- 72 
WP_013223546  401 alqDRLLDLVAGLDr---------TARD-TVADQAVAEAMLALESDWAFMVTKDSAADYARRRAAVHTERFDALAGLL-- 468 Amycolatopsis ...
WP_016336570  403 ALQDRMLDLVAGMDt---------TTRD-SVRDQAVAEAMLALSSDWAFMVTKDSAADYARRRAKVHTERFDTLAGLL-- 470 Amycolatopsis ...
3N8T_A        502 yvKIGE-FDVKLLEELEE----RDNPF 523 Thermococcus kodakarensis
Q7VBG0        489 --ENKEtFSESTLIDFEE----EDSIF 509 Prochlorococcus marinus
WP_011933490  490 --DRREdLPEHWLEDVEA----EDALF 510 Synechococcus sp. CS-197
Q7V6N1        489 --NDKQhLPEDWLITLES----EDGLF 509 Prochlorococcus marinus str. MIT 9313
Q46K00        489 --KNNKlINEKILEEIEK----EDCLF 509 Prochlorococcus marinus str. NATL2A
AHC24972      485 --ASGR--RPQ-AQRLAEdwnrADGLF 506
jgi:Srot_1401 490 --ESGH--EGK-AVRLAQgwniADSLF 511
1_pfamImport   73 --RAGH--PD--ARTLAEryraASLPF 93 
WP_013223546  469 --RRGD--RAR-AVELAAayraDDGPF 490 Amycolatopsis mediterranei
WP_016336570  471 --RDGA--LDR-ARETAAafrrDDGPF 492 Amycolatopsis keratiniphila
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap