6EML


Conserved Protein Domain Family
Rio2_N

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pfam09202: Rio2_N (This model is not part of the current CDD release)
Rio2, N-terminal
Members of this family are found in Rio2, and are structurally homologous to the winged helix (wHTH) domain. They adopt a structure consisting of four alpha helices followed by two beta strands and a fifth alpha helix. The domain confers DNA binding properties to the protein, as per other winged helix domains.
Statistics
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PSSM-Id: 518749
Aligned: 26 rows
Threshold Bit Score: 94.924
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6EML_r         8 MRYLTTDDFRVLQAVEQGSRSHEVVPTPLIHQISGMRSqSGTNRAISDLAKLSLISKm--RNVKYDGYRLTYNGIDYLAL 85  Saccharomyces c...
Q8I1N8         8 FSFLSRNEYRVLTAIEMGMRNHEYLSVSLISSIANLRK-EGIVSVLKKLLKNKLISH---QNKKYDGYKLTYLGYDFLAL 83  Plasmodium falc...
Q5CYZ6        11 MRFISKDEWRILTAVEMGMRNHEYVSPQLIESISNLRR-TGSYQLLQNLLRNKLVSR---ESKIYEGYKLSYLGYDFLAL 86  Cryptosporidium...
Q8STQ0         8 VWSLSRMHLRILRTAEECMRSHAIVPFDVLKSRSRIK--GNFMEHAIDLCKLKFLSYv--E----NGYKLTYSGHDCLAI 79  Encephalitozoon...
Q8ZYP5         9 YHELSKRDLRVLRVIEVGHRRYEFVPEELITKWARYRR-EEVLDSIRRLHYYGFLRR---NLAPYKGWKITALGYDVLAL 84  Pyrobaculum aer...
Q2FSW1         8 IKSLHKYELRILQSIEYLMSRYSWVPEEELVHNSRLSA-NEVHFRLSKLMEKGMVKY---SQVPYPGYCLIFNGYDTLAI 83  Methanospirillu...
Q8TWN2        11 LPEMEPEDFKVLRALELEMRRHDWVPFDRLLERTGLDE-KELGYRLSRLDRWDMVVRtrrQTVGYLGYQLRPEGYDALAL 89  Methanopyrus ka...
Q9HSL0         9 IAALDPEDFHLLSGVEHGMRFSEWVSREKLPEFSRLTP-QEVDYRLDRMLDREFLER---KTIQYEGVQLTFAGYDVLAL 84  Halobacterium s...
WP_011321854   9 MAELEEPDFHLLSGIEHGMRFSRWVAEGKLPKFSRLDE-EELTYRLDRCMDRELIER---KTIQYTGYRLTFEGYDALAL 84  Natronomonas ph...
Q5V0R0         9 MAELEPEDFHLLSGVEQGMRFSEYVAREKLTEFSRLTT-EDVDYRLDRCADRGLVER---KTIQYEGFKLTFEGYDTLAL 84  Haloarcula mari...
6EML_r        86 KTM-LNR 91  Saccharomyces cerevisiae S288C
Q8I1N8        84 RTF-LKR 89  Plasmodium falciparum 3D7
Q5CYZ6        87 RAL-NKR 92  Cryptosporidium parvum
Q8STQ0        80 NTL-RQR 85  Encephalitozoon cuniculi
Q8ZYP5        85 HTLrVQR 91  Pyrobaculum aerophilum
Q2FSW1        84 SHL-VKK 89  Methanospirillum hungatei JF-1
Q8TWN2        90 RAL-VDQ 95  Methanopyrus kandleri
Q9HSL0        85 HTF-AER 90  Halobacterium salinarum
WP_011321854  85 RTF-SER 90  Natronomonas pharaonis
Q5V0R0        85 HTF-AER 90  Haloarcula marismortui
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