Conserved Protein Domain Family
Endonuc-BsobI

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pfam09194: Endonuc-BsobI 
Restriction endonuclease BsobI
Members of this family of prokaryotic restriction endonucleases recognise the double-stranded sequence CYCGRG (where Y = T/C, and R = A/G) and cleave after C-1. They catalyze the endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates.
Statistics
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PSSM-Id: 490189
Aligned: 7 rows
Threshold Bit Score: 517.788
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015143106     4 YLNHLQSSDDLVTTYEATRAGFVALALEKNRRATPYVAEARALQAAANQVRNPADLLNVQGIEMGLLTAAGLSDKSLAHL 83  Pleurocapsa s...
P0A457           3 YQYHIQSNDDLVTPYQEVRAGFVALALERNRKATPFVEQARALKIRVSQIERPQDLLQMRDIRPTLLAASGVSDKAAGHL 82  Nostoc sp. PC...
wustl:cce_1072  14 YKKHLSSWESLVTSYEQTRAGFISLALEKNRKATPFVEEAKALKSIASTIESPIELINITQIKSALLTASGVSDKAKKYL 93 
WP_022276916     3 eeLYIKCAEELVTSHEQTRAGFIEAALAKNYKAKPYIEQAKTLKSLASCVSTPAELLNIPEIRNCLLTASGLSDKSLKYF 82  Phocaeicola c...
WP_014433037     6 YQNHLRSSDDLVTSYEATRAGFVALALEKNRRSTPYVAEARALQQAALQARTPVDLLAIEGIEAGLLTAAGLSDKALVHL 85  Caldilinea
WP_016482331     6 YHDHLESSEDLVTTYEATRTGFVALALEKNRRATPFVVEARALQEAASKAKTPIDLLNINGIETGLLTAAGLSDKALVHL 85  Chthonomonas ...
WP_015955012     4 YHNHLQSSDNLITTPEAARAGFVTLALEKNRRATPYIVEARALQTAASNAKRPAELLEIKEIEKGLLTAAGLSDKSLKHL 83  Gloeothece ci...
WP_015143106    84 TAEDKIDAINGLIKNFLEPAGANFVEELVFRFLLTRGDTLGGSMRNVGGALAQRKLTRAILSTLTIAGQSYHWQ---HSK 160 Pleurocapsa s...
P0A457          83 QEQDKVDAIEGLIQNFLEPAGENFVEELVYRFLLTRGDTLGGSMRNVGGILAERKFARYIISALTLSNTSYKWL---DKN 159 Nostoc sp. PC...
wustl:cce_1072  94 TENDKNEAIKRLIENFLEPAAKDFVDELGYRFLLTRGDSLGGIIRNLGGVLGERKMTRMLIATLSIQGISYCYL---HSK 170
WP_022276916    83 TEEDKDEAIKKLISEFLEPTGATFVDELVYRFLLIKGDSLGGSMRNYVGLIAQMKLIRKLLSLLSMQKISFMVLfknDKK 162 Phocaeicola c...
WP_014433037    86 LPEDKVEAINSLIKNFLEPAGEKFVEELVFRFLLTRGDTLGGSMRNIGGVLAQRKLTRAIISSLRIAGIAYRWQ---HSK 162 Caldilinea
WP_016482331    86 QSEDKIEAIKSLIKNFLEPAGEKFVEELVYRFLLTRGDALGGSMRNIGGALAQRKITRAIVSTLRIAGIEYRWQ---HLM 162 Chthonomonas ...
WP_015955012    84 NWEDKVEAINGLIRNFLEPAGEKFIEELVFRFLLTRGDTLGGSMRNVGGALAQRKLTRAILSTLTIAGISYHWL---HLK 160 Gloeothece ci...
WP_015143106   161 TKKWIAMT-NDDAEIELSLRGLSWESDLGRRTLIYNLNIPLVKSNVDLCLFNLAPEALPANKSSKiepveVEPYtIALGE 239 Pleurocapsa s...
P0A457         160 SKTWLNQP-DDDTDIELRLRGLSWNLEGRNRTFIYNVNVPIVRKNIDICLFDCRQNEIEKNIISN-----PNIY-IALGE 232 Nostoc sp. PC...
wustl:cce_1072 171 SKEWIVGS-QDDADVEIFLKGLSWNKSNQARTLIYNLTVPIVKKNVDLCLLDAKPEQFMRRNNKNschyfPSNY-IALEE 248
WP_022276916   163 ENKWQSLDyEHIFDKADEVAAIQWNNKQGSRILFFNATIPLVKNNIDICLYQGGIEDFDSGNIVKk----DDKA-ILLGE 237 Phocaeicola c...
WP_014433037   163 TRQWADMA-DDDSEIELSLRGLSWENNGKLRTLVYNLTVPLVKNNVDICLFNLGPDELQATRYQS-----AGSY-LALGE 235 Caldilinea
WP_016482331   163 TRQWIDVS-GDDAEIELSLRGLSWRIQGKHRTLIYNLTVPLVKSNVDMCLFSLDPQELQATEFKI-----PESY-FALGE 235 Chthonomonas ...
WP_015955012   161 TKKWAAMT-NDDSEIELSLRGIYWESDRGSRTLIYNLNVPISNSNVDMCLFNLTPTELLNSKYTI-----VESY-IALGE 233 Gloeothece ci...
WP_015143106   240 LKGGIDPAGADEHWKTAQAALNRIRQAFADAGHSPLTFFVGAAIERRMAGEIWEQLQSGMLSNAANLNEENQVASISRWL 319 Pleurocapsa s...
P0A457         233 LKGGIDPAGADEHWKTANSALARIRTAFDRHSLKPYTFFVGSAIEKSMAEEIWHQLNSGILTNAANLTQPDQVASLCAWF 312 Nostoc sp. PC...
wustl:cce_1072 249 LKGGIDPAGADEHWKTANSALNRIKKAFLSNDLHPKTFFIGAAIEKAMAKEIFNQLDAKHLSNAANLTDDNQLISLCEWL 328
WP_022276916   238 LKGGIDPAGADEHWKTGSSALERIREAFA--GHSIKTSFIAAAIEKKMATEIYTQLQDGTLQNAANLTVDGQLTAYCNWM 315 Phocaeicola c...
WP_014433037   236 LKGGIDPAGADEHWKTARAAFDRIREAFSKTKHSPHTFFIGAAIEKKMASEIWDQLERGLLTNAANLNDPNQIASVSRWL 315 Caldilinea
WP_016482331   236 LKGGIDPAGADEHWKTARAAIDRIRQAFSKAGYSPHTFFIGAAIERRMADEIWNQLETGLLSNAANLNNHRQVASISRWL 315 Chthonomonas ...
WP_015955012   234 LKGGIDPAGADEPWKTARTALDRIREAFSTLGHSPHTFFVGAAIERKMAEEIWSQLYNGTLSNAANLNQENQVASISLWL 313 Gloeothece ci...
WP_015143106   320 CSL 322 Pleurocapsa sp. PCC 7327
P0A457         313 IQL 315 Nostoc sp. PCC 7120 = FACHB-418
wustl:cce_1072 329 INL 331
WP_022276916   316 INL 318 Phocaeicola coprophilus
WP_014433037   316 CML 318 Caldilinea
WP_016482331   316 CGl 318 Chthonomonas calidirosea
WP_015955012   314 CNL 316 Gloeothece citriformis
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