1CID,8Z7N


Conserved Protein Domain Family
CD4-extracel

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pfam09191: CD4-extracel (This model is not part of the current CDD release)
CD4, extracellular
Members of this family adopt an immunoglobulin-like beta-sandwich, with seven strands in 2 beta sheets, in a Greek key topology. They are predominantly found in the extracellular portion of CD4 proteins, where they enable interaction with major histocompatibility complex class II antigens.
Statistics
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PSSM-Id: 518745
Aligned: 22 rows
Threshold Bit Score: 142.822
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1CID_A         1 TSITAYKSEGESAEFSFPLNLGEESL-----QGELRWKAEKAPSSQSWITFSLKNQKVSVQKSTSNPKFQlSETLPLTLQ 75  Norway rat
XP_004092195 207 ASSTVYKKEGEQVEFSFPLAFTVEKLt---gSGELCWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQmDKKLPLHLT 283
XP_023372849 128 ASSAIYKKEGEQVEFSFPLTFKEERL-----EGELRWQAEKASSSKPWVTFFLENNKVSVKWITQDPKLQmEETLPLRFT 202
XP_013000578 221 IPNPFYKKEKESLEMCFPLTFNNEDLp---fTGELIWRADKASSSHSWITFSVANQRVSVQNDNQDPKLQmAEKTPLCLT 297
EHB18620     194 SPRTAYKKEGEALELSFPLTFDDEAH-----LGELSWRADRASSSQVWISFSVENRKVSVQMAALDPQLQmAEKTPLRLI 268
NP_001092760 216 PYQRYYKIAGKDAEFNFPLNLGEQDLnrmvpNGELTWHGEGAAS-QRLAKFSWKDDSLTLED---KFKFKlSKGRPITLS 291
EGV98537     208 SSTIVYKKEGEPAEFSFPLTFQDENL-----QGELMWRAEKASSPGPWVTFSLENKKVAVLKSWGTAKLQmKEELPLHLK 282
P05540       210 TSITAYKSEGESAEFSFPLNLGEESL-----QGELRWKAEKAPSSQSWITFSLKNQKVSVQKSTSNPKFQlSETLPLTLQ 284 Norway rat
P06332       211 TAITAYKSEGESAEFSFPLNFAEENG-----WGELMWKAEKDSFFQPWISFSIKNKEVSVQKSTKDLKLQlKETLPLTLK 285 house mouse
8Z7N_C       207 ASSIVYKKEGEQVEFSFPLAFTVEKLt---gSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQmGKKLPLHLT 283 human
1CID_A        76 IPQVSLQFAGSGNLTLTLDR--G-ILYQEVNLVV 106 Norway rat
XP_004092195 284 LPQALPQYAGSGNLTLDLEAktG-KLRQEVNLVV 316
XP_023372849 203 LPQALPQYAGSGNLTLVITS--R-KLQQEVKLVV 233
XP_013000578 298 LSSVLLQHAGSGNLTLTLDG--GqRLSQEVKLVV 329
EHB18620     269 LSEALLQHAGSGNLTLTLAG--DlKLHQEVNLVV 300
NP_001092760 292 LSPVLLHHAGSGVFSLMLPS--G-TVKQKVDLVV 322
EGV98537     283 IHQVSLDNAGSGNLTLTLAK--G-KLRQEVNLVV 313
P05540       285 IPQVSLQFAGSGNLTLTLDR--G-ILYQEVNLVV 315 Norway rat
P06332       286 IPQVSLQFAGSGNLTLTLDK--G-TLHQEVNLVV 316 house mouse
8Z7N_C       284 LPQALPQYAGSGNLTLALEAktG-KLHQEVNLVV 316 human
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