Conserved Protein Domain Family
PuR_N

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pfam09182: PuR_N (This model is not part of the current CDD release)
Bacterial purine repressor, N-terminal
The N-terminal domain of the bacterial purine repressor PuR is a winged-helix domain, a subdivision of the HTH structural family. It consists of a canonical arrangement of secondary structures: a1-b1-a2-T-a3-b2-W-b3, where a2-T-a3 is the HTH motif, a3 is the recognition helix, and W is the wing. The domain allows for recognition of a conserved CGAA sequence in the centre of a DNA PurBox, resulting in binding to the major groove of DNA.
Statistics
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PSSM-Id: 490181
Aligned: 69 rows
Threshold Bit Score: 77.8824
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q97E90              5 SRNQRVSAITKTLIECPNKVINLNYFTDLFNAAKSTISEDLVIVRDIMDKLGYGKVETIAGASGGVKYS 73  Clostridium acetobuty...
P0A3Z9              2 KRNERLVDFTNFLINHPNQMLNLNELSKHYEVAKSSISEDLVFIKRVFENQGVGLVETFPGSLGGVRFT 70  Lactococcus lactis su...
Q8EU36              2 KRSNRLVVLTDYFLENPRQHIKLTYFVELCKTTKSSVSEDLDIIHDVFQQQGKGYLQRTTGAGGGVQYI 70  Oceanobacillus iheyensis
KLMBRSOA:TPY_0187   3 dRNKRLIAVTRHLSQKARRQVSLTELSRLFGVAKSTLSEDLLLIKEALETYGLGHVESQVGVTGGVVFS 71 
WP_013048539        4 QRTERLIRTVCRFLTTPSRQISLTALSNDFGVSKTVISDDVVLIDSALTQEGLGGIQVDRGRTGGASFI 72  Aminobacterium colomb...
WP_006300830        4 QRTERLVRMASRFLLGPSRQVSLTELAGDFEVSKTVVSDDVEIIDGAFAEEGLGRILVDRGRCGGAHFV 72  Aminomonas paucivorans
2_pfamImport        1 QRTERLVRIASRFMLGPSRHLSLTDLAQDFEVSKTVISDDMEIIDKAFSDEMLGGIEVDRGRSGGAYFV 69 
WP_008522631        4 QRIERLIRITSRFLSSPSSPISLTGLADDFSVSKTVISDDVAVIDETLQLEGFGRIVVDRGRAGGAAYV 72  Jonquetella anthropi
WP_014163286        4 eRIERLIRIVTGFLLNPSDSVSLTNMARQFGVSKTVISDDISMIDASLEKEGIGRVNVSKGRGGGAflk 72  Thermovirga lienii
WP_012809620        2 QRHERLIRLTRRLVERPMAPIGISALAEAWGVAKSTLSEDVQLVREVLAEDGAGRVETLVGAQGGVRFV 70  Alicyclobacillus acid...
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