Conserved Protein Domain Family
Vit_b-sht_shell

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pfam09175: Vit_b-sht_shell (This model is not part of the current CDD release)
Vitellinogen, beta-sheet shell
This entry represents the beta-sheet shell domain found in vitellinogen, which generally corresponds to the lipovitellin-2 peptide product. This domain consists of several large open beta-sheets.
Statistics
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PSSM-Id: 518736
Aligned: 25 rows
Threshold Bit Score: 201.346
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_069050631  1086 PTVTFQAVVVRSNAKQEGYVATACISHTTTKdkMKLLISDVNKESKWKMSTDAVMdMDPLRT----KVQVRWGEDHWKYK 1161
XP_007233218  1063 PVISVKLLAISPNEKLLGYEVAAYYTLARQRndMELIISEVAEEGNWKICADLSVdRTQEEA----KGHFKWGAECQSYE 1138
XP_005459969  1083 PVVSIKAIAMSGNQNLEGFDVTLYNPSEGDTlkAQMIVSHVGDAANWKMCVDASA-QSPAQSsanlKAKISWGAQCKPYE 1161
2_pfamImport     1 AVFNVNAFAVSGAKKPEGYNAVFYYTTEE-VkkTQLVVSHVKENSNWKICIDTSV-KALVGA----KANIKWGAECQSYE 74  
XP_011613259  1065 PLFSFKALAMSGSQRPEGYEAALYYRPEASLpnMQLNVSQVGENANWRVCMDSTM-RLPSQT----KANIRWGAECQSYK 1139
10_pfamImport    1 ALFGFKALATSGGQRPEGYEGALYYNPEAGVpnSQLTLSQVGENTNWSMCMDSTM-MAPSET----KANIRWGAECQTYK 75  
14_pfamImport    1 AIFNFKAFAICENQKPEGYDAVMYYSPEASIknAQLIVSQVGASTNWKMCVETSL---DAEA----KAHVTWGDESQTYD 73  
XP_069050465  1271 PVLAILARAVRTDGKAQGYQVAFYHHPRSSQprAQVIVAAIQEKDNWKMCGDGMM-LSQHKA----MAKMSWGEDCQQYL 1345
XP_069050464  1351 PLFAVVARARRSDGLQQGYQLAVYADTTLSKprVQALAIEINSKDKWQVCADAEL-HNDYKA----LALVRWGQECREYK 1425
XP_005993912  1346 PVLAIVTRAVRSDGKQQGYQIAAYANFRSSKprVQVLAMELAKSDRWRVRVDGIL-LSPHKA----MGIIKWGEEGKNYK 1420 coelacanth
XP_069050631  1162 FAGEARYVEKcGSYPSVKAKLQWEKVPRFMKTFGEKVHEYLPGIALLLQCYQKQQRNPSHQVSVTLMPTSSSAMfDVILK 1241
XP_007233218  1139 IGLNISGAGLtDTKPSINAGVNWREVPSFIQVIGKRMREYFPGVSYVMGFSQKHEKNTDHEVSVDFVASSQEGF-DVKVK 1217
XP_005459969  1162 ISVTAAAAQSsASRPTLEAKVQWANVPEEMANYCSSMERYIPGMALLSGFNQTWESNANQEVSASIVSASSDSI-DITIK 1240
2_pfamImport    75 MSITSETAHLpGTLPTIKAKIHWSRMPEKVTQACSRLESYIPGMALLLNFYQKQEKNAGQEISASVIASSADSI-DVRIQ 153 
XP_011613259  1140 MSVTAETAHLpGAKPTVKASLDWSEIPVSMAELGRRIRSYIPGITFLYGFSQQNEMNPQKEVSASVVVASADSV-DVKVK 1218
10_pfamImport   76 MSVRAETAHLpASKPALKASLNWGEIPESMAEFGRRIGRYIPGMAFLYGFSQQNENNAKQEVSASMVVTSADSV-EVKVK 154 
14_pfamImport   74 MSMEATAAYInGSKPELKAKVQWRRISEYMTELGKRIERYIPGVALLYGFSERNERNPEQEVSATVVAAWTDSV-DVEIK 152 
XP_069050465  1346 AVVKAETGRL-AHNPAVQLKIKWRKIAGIVKHVSKILFDYVPGVSYMAGFSEDRRNNPSKQIKMIFAATSSRTI-DAVIK 1423
XP_069050464  1426 VAVKAATGRI-ATHPALQVKAKWWKIPRAMKYAGETMAEYVPGAALMLGFSQKWHKHTSKQLALYIAMSSPRTV-DLFIK 1503
XP_005993912  1421 VVVKAQTGQF-AAHPAVQVKVDWTDVPRTVKETVRAADKYLPGAAYLAGFSEKWRRNPSHQVAVILASASSRTI-DIVVK 1498 coelacanth
XP_069050631  1242 TPGLTVYGYTIPLP 1255
XP_007233218  1218 TPKLTVYRQGIPSP 1231
XP_005459969  1241 LPKYTVFRQAVPLP 1254
2_pfamImport   154 LPEYTIFRQAISFP 167 
XP_011613259  1219 FPEYTVFRQAIPFP 1232
10_pfamImport  155 FPEYTVSRQAIPFP 168 
14_pfamImport  153 LPEYTVYNKAMSFP 166 
XP_069050465  1424 MPRFTVYKRAVHVP 1437
XP_069050464  1504 TPRMALCKQAVPMP 1517
XP_005993912  1499 LPQMTLYRQAIPVP 1512 coelacanth
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