1LMI


Conserved Protein Domain Family
DUF1942

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pfam09167: DUF1942 
Domain of unknown function (DUF1942)
Members of this family of bacterial proteins assume a beta-sandwich structure consisting of two antiparallel beta-sheets similar to an immunoglobulin-like fold, with an additional small, antiparallel beta-sheet. The longer-stranded beta-sheet is made up of four antiparallel beta-strands. The shorter-stranded beta-sheet consists of five beta-strands, four of these beta-strands form an antiparallel beta-sheet. The exact function of this family of proteins is unknown, though a putative role includes involvement in host-bacterial interactions involved in endocytosis or phagocytosis, possibly during bacterial internalisation.
Statistics
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PSSM-Id: 490166
Aligned: 14 rows
Threshold Bit Score: 145.61
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1LMI_A              4 PITGKLGSELTMTDtvGQVVLGWKVSDLKSSTAVIPgYPVAGQVWEATATVNAIRGSVTPAVSQFNARTADGINYRVLWQ 83  Mycobacter...
3_pfamImport        1 PIVGKLGSTLQATDtvGQVVYSWRVSGLQPSSDTMPgYPVAGKVWESTATVNAIRGSVTPAISQFNAVAPDRAAYRVLWQ 80 
WP_011727224       38 VSANPLGSQARLEN--GDVVQAWTISDLKPSSDPIP-YAVQGTLWEATATDEAVSGSVIPIVSNLNARAANGENYRVLFQ 114 Mycoliciba...
P9WIP1             32 PITGKLGSELTMTDtvGQVVLGWKVSDLKSSTAVIPgYPVAGQVWEATATVNAIRGSVTPAVSQFNARTADGINYRVLWQ 111 Mycobacter...
WP_011730658       30 eteAGFGEAQDLVAptGD-TASVTVTDIALSSDQIP-TEVEGQLYEATATIEAKEGTVTPVLSNFNARTADGQSYQAVYE 107 Mycoliciba...
1_pfamImport        1 PTVVGFGETEEIQSpgGAI--DYTVKNLQPSGH-------NDGIWYSDVTAKAVSGTPTPNIADFNARAVNSSTFAVMKG 71 
Q73Z85             32 PQVLQFGQMAEISSngGTI--DYTVSNLQPSGH-------NDGVWYSDVTAKGVSGNAVPNIADFNARAVNSSTFAVMKG 102 Mycobacter...
MSJTU:JDM601_3074  32 PAIQPFGTPEQLHD--GALSTSYTVSNLGPANVVIPgYQPDGKLYQADVTARADRGTVTPLVTAFNARAANSDTYRVINT 109
VBC:MMAR_1823      26 PTIQGFGTSERLVD--GPMVTSYTVGNLQLSDVTIAgYLPQGQLYSADVTARSVTGTITPLVSSFNARAANGDTYGVVNE 103
WP_011730517       37 VTTSTLGSAAKLNN--GDVVQAWTVTDLKPSSDTIP-YEVRGKLWEVTATDEAVQGNVTPIVSNFNVRAADGTNYRALFQ 113 Mycoliciba...
1LMI_A             84 AAGPDTISGATIPQGEQSTGKIYFDV-TGPSPTIVAM-NNGMEDLLIW 129 Mycobacterium tuberculosis
3_pfamImport       81 VAAPKAISGATIPQGAQSTGKIYFDV-TGPPPTTVTM-NNGMEDLMVW 126
WP_011727224      115 VATPQGVNPSTLAPGQKTTGKVYFDV-TGEAPTTVVY-NDGERDLLAW 160 Mycolicibacterium smegmatis
P9WIP1            112 AAGPDTISGATIPQGEQSTGKIYFDV-TGPSPTIVAM-NNGMEDLLIW 157 Mycobacterium tuberculosis H37Rv
WP_011730658      108 VPASEG-NPEPLTEGASTTGKVYFDV-KGEAPDSVVY-SDVGSDEVIW 152 Mycolicibacterium smegmatis
1_pfamImport       72 -NEVDGLPNGPIAQGSQSSGRLYFDVkSGTAPDSVVYrDAGGHDKVVW 118
Q73Z85            103 -NQTDGLPEGPLPLGTPVTGRLYFDVrNGTNPDSVVYrDAGGTDKVVW 149 Mycobacterium avium subsp. paratuberculosis
MSJTU:JDM601_3074 110 VPTPGGINPGPIAQGASADGKIYFDV-TGPPPDGVVY-NDGVQDVMIW 155
VBC:MMAR_1823     104 VPAPGGLNPAPILQGNSQSGVLYFDV-TGPPPNGVVY-NDGVQDVLIW 149
WP_011730517      114 VATPQGVNPSTIPQGEKASGKIYFDV-TGPEPTTVVY-NAGGKDLLVW 159 Mycolicibacterium smegmatis
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