1LMI


Conserved Protein Domain Family
DUF1942

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pfam09167: DUF1942 (490166 is an unknown moldel)
Domain of unknown function (DUF1942)
Members of this family of bacterial proteins assume a beta-sandwich structure consisting of two antiparallel beta-sheets similar to an immunoglobulin-like fold, with an additional small, antiparallel beta-sheet. The longer-stranded beta-sheet is made up of four antiparallel beta-strands. The shorter-stranded beta-sheet consists of five beta-strands, four of these beta-strands form an antiparallel beta-sheet. The exact function of this family of proteins is unknown, though a putative role includes involvement in host-bacterial interactions involved in endocytosis or phagocytosis, possibly during bacterial internalisation.
Statistics
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PSSM-Id: 490166
Aligned: 13 rows
Threshold Bit Score: 145.61
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1LMI_A          4 PITGKLGSELTMTDtvGQVVLGWKVSDLKSSTAVIPgYPVAGQVWEATATVNAIRGSVTPAVSQFNARTADGINYRVLWQ 83  Mycobacterium ...
WP_023986187   37 VTTTHLGSQAQLHD--GNIVQGWTVTGLKVSTDVIP-AQIHGTLWEATATDEALQGNATPIVSNLNARARNGETYRALWG 113 Mycolicibacter...
WP_013828553   31 PATHPLGTQGTLPE--GPGVHGWTVADLRPSSDAIP-YQPRGTLWEATATDEAIQGTVFPIVANLSARSASGQDYQSLFT 107 Mycobacteriaceae
WP_013828554   34 PTTHPIGSQATIDN--GGVIQGWTISDLRPSSDAIP-YQPHGTLWEATATDVAIQGTVTPVVANLGARSPSGQTYPALFG 110 Mycolicibacter...
3_pfamImport    1 VSANPLGSQARLEN--GDVVQAWTISDLKPSSDPIP-YAVQGTLWEATATDEAVSGSVIPIVSNLNARAANGENYRVLFQ 77 
WP_013828774   32 PIVGKLGSTLQATDtvGQVVYSWRVSGLQPSSDTMPgYPVAGKVWESTATVNAIRGSVTPAISQFNAVAPDRAAYRVLWQ 111 Mycobacteriaceae
1_pfamImport    1 ---AGFGEAQDLVAptGD-TASVTVTDIALSSDQIP-TEVEGQLYEATATIEAKEGTVTPVLSNFNARTADGQSYQAVYE 75 
4_pfamImport    1 PTVVGFGETEEIQSpgGAI--DYTVKNLQPSGH-------NDGIWYSDVTAKAVSGTPTPNIADFNARAVNSSTFAVMKG 71 
Q73Z85         32 PQVLQFGQMAEISSngGTI--DYTVSNLQPSGH-------NDGVWYSDVTAKGVSGNAVPNIADFNARAVNSSTFAVMKG 102 Mycobacterium ...
WP_013830003   32 PAIQPFGTPEQLHD--GALSTSYTVSNLGPANVVIPgYQPDGKLYQADVTARADRGTVTPLVTAFNARAANSDTYRVINT 109 Mycolicibacter...
Q73VR2         32 PNIQGFGVSEQLVD--GPLVTDYTVSNLQPSNVSIPgYTPKGTLYQADVSVRSDGGVVTPMVHDFIARGPNGQNYRVIDN 109 Mycobacterium ...
VBC:MMAR_1823  26 PTIQGFGTSERLVD--GPMVTSYTVGNLQLSDVTIAgYLPQGQLYSADVTARSVTGTITPLVSSFNARAANGDTYGVVNE 103
2_pfamImport    1 VTTSTLGSAAKLNN--GDVVQAWTVTDLKPSSDTIP-YEVRGKLWEVTATDEAVQGNVTPIVSNFNVRAADGTNYRALFQ 77 
1LMI_A         84 AAGPDTISGATIPQGEQSTGKIYFDV-TGPSPTIVAM-NNGMEDLLIW 129 Mycobacterium tuberculosis
WP_023986187  114 VATAQGVNPSTLAQGQKTTGKVYFDV-TGEAPDSVVY-ATSAADLIVW 159 Mycolicibacterium neoaurum
WP_013828553  108 VPTPQGIVPTGLTQGQKTSGKVYFDV-TGDAPNSMVY-QAGGADLIRW 153 Mycobacteriaceae
WP_013828554  111 VATPQGVNPSNLAQGQKTTGKVYFDV-TGDAPNSAVY-QFAGKDQLIW 156 Mycolicibacter sinensis
3_pfamImport   78 VATPQGVNPSTLAPGQKTTGKVYFDV-TGEAPTTVVY-NDGERDLLAW 123
WP_013828774  112 VAAPKAISGATIPQGAQSTGKIYFDV-TGPPPTTVTM-NNGMEDLMVW 157 Mycobacteriaceae
1_pfamImport   76 VPASEG-NPEPLTEGASTTGKVYFDV-KGEAPDSVVY-SDVGSDEVIW 120
4_pfamImport   72 -NEVDGLPNGPIAQGSQSSGRLYFDVkSGTAPDSVVYrDAGGHDKVVW 118
Q73Z85        103 -NQTDGLPEGPLPLGTPVTGRLYFDVrNGTNPDSVVYrDAGGTDKVVW 149 Mycobacterium avium subsp. paratuberculosis
WP_013830003  110 VPTPGGINPGPIAQGASADGKIYFDV-TGPPPDGVVY-NDGVQDVMIW 155 Mycolicibacter sinensis
Q73VR2        110 VAVPNGLSPAPIPQGTESTGTLYFDV-TGAPPNGVVY-NDGMQDVLMW 155 Mycobacterium avium subsp. paratuberculosis
VBC:MMAR_1823 104 VPAPGGLNPAPILQGNSQSGVLYFDV-TGPPPNGVVY-NDGVQDVLIW 149
2_pfamImport   78 VATPQGVNPSTIPQGEKASGKIYFDV-TGPEPTTVVY-NAGGKDLLVW 123
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