1ZL3


Conserved Protein Domain Family
TruB-C_2

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pfam09157: TruB-C_2 
Pseudouridine synthase II TruB, C-terminal
Members of this family adopt a secondary structure consisting of a four-stranded beta sheet and one alpha helix. They are predominantly RNA-binding domains, mostly found in Pseudouridine synthase II TruB.
Statistics
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PSSM-Id: 401192
View PSSM: pfam09157
Aligned: 64 rows
Threshold Bit Score: 41.7869
Threshold Setting Gi: 42559742
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1ZL3_A        265 PVVNLPLTSSVYFKNGNPV-RTSGAPLEG-LVRVTe---GENGK--FIGMGEIDdEGRVAPRRLV 322
Q89AF6        244 PEVNIVPNVIKNLQNGQKVkTh-SGFINQ-FVRITe---GINRR--FIGIGKINnINELYSYRLI 301 Buchnera aphidicola str. Bp (...
Q1LSL0        253 PAIKLSKDSVARVRKGQMVaVd-QCWQSG-LVRMCe---NKGETtyFFGIGEITqPGVLKPKRLL 312 Baumannia cicadellinicola str...
Q2NW21        249 PLVNLPSDLAARLRLGQTVa-VTAQPQAG-LVRLTe---GDAGR--FFGIGEIAaPGRLTPRRLI 306 Sodalis glossinidius str. 'mo...
Q11BC6        253 PEIVLGDDAAGRIRLGNPV----IVRGRDaPVQAPeawaSLRGR--LIAIGMVE-AGMFKPKRVF 310 Chelativorans sp. BNC1
Q3IJ75        253 PVVEISKEQGSIFSHGQAIdL-DIDLPEG-AIKVV-----ADGI--FIGTGERNaSGHLKVKRGL 308 Pseudoalteromonas haloplankti...
O66922        232 PEVRLNTFEAGKILQGKRIlI-KNYDYEG-LVKIY-----EDSK--FIGIGELK-GGVLSPKRLL 286 Aquifex aeolicus VF5
Q5ZRV6        242 tPVILSDSEVTAIRQGKVI-SNKTGAVEGeDLRLY----GEQSQ--FIGIGQALiHGDIKAKRLV 299 Legionella pneumophila subsp....
Q47D96        241 PIVGVEGPEAERFRHGNPV--SLPAGLAG-KARVY-----AEGR--LIGVGEPGhGGLLWPKRLV 295 Dechloromonas aromatica RCB
tigr:DNO_0027 237 PPLAIPEDKIRFICHGNDI---AITATNG-LYQL-----SADGH--FLGIGEAR-DGRLYPKRLL 289 Dichelobacter nodosus VCS1703A
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