Conserved Protein Domain Family
Glucodextran_N

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pfam09137: Glucodextran_N 
Glucodextranase, domain N
Members of this family, which are uniquely found in bacterial and archaeal glucoamylases and glucodextranases, adopt a structure consisting of 17 antiparallel beta-strands. These beta-strands are divided into two beta-sheets, and one of the beta-sheets is wrapped by an extended polypeptide, which appears to stabilise the domain. Members of this family are mainly concerned with catalytic activity, hydrolyzing alpha-1,6-glucosidic linkages of dextran to release beta-D-glucose from the non-reducing end via an inverting reaction mechanism.
Statistics
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PSSM-Id: 490146
Aligned: 55 rows
Threshold Bit Score: 230.924
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_006054303  686 APSGPESRPrWT-TGEKYGVGTVADhtedDPSRVWFTLT-EGSLTEVRFPRVDLMNLRTLDMLVvdadpessytarTHNE 763  Halogeometric...
WP_015795713   41 A--GPGGPSyFD-LARKDCLGTAQN----SHSKVWYTVA-DGVLSDVYEPTVDNTNVQTLQYVV------------TDGS 100  Catenulispora...
WP_013226430   34 CCGG---GAsWA-TGNKSALGTATT----TTSPVWFTVA-DGITSEVFYPRADIPNSQDRQFIV------------TDGS 92   Amycolatopsis...
WP_015795712   46 ASGGPGTASfWNeTSGVQGFATALS----PSSKVWYTLG-NGGLENVFYPQTDNPDTYGLQYYV------------TDGS 108  Catenulispora...
WP_016335117   33 APGAPGTGAaWT-TGGKEGFGTAAG----AASKVWFTLG-QGISHEIYYPTVDTANVQDLQYVV------------SDGA 94   Amycolatopsis...
WP_011875007   33 APGAPGTDPgYA-GADKLGFGTSRD----AQSPVWFTLG-RGGAADLYYPNLSTPASRQLQVVV------------TDGA 94   Saccharopolys...
WP_015621701   81 APGAPGVDEqYL-PADKSGLGTTTT----TASRVWFTVQkEGGLGEVYYPTVGSPSTRALEFVV------------ADRR 143  Actinoplanes ...
WP_014443803   36 APGAPGTDQqYL-PADKAGLLTATG----TRSKVWVTLQrGGGIGEIFYPDLGTPSARALQFQV------------TGPS 98   Actinoplanes ...
WP_013230293   28 APGAPGTHPsWL-PANKTGFGTAHD----RSSNVWFTLQ-GGQLSEVYYPDMSTPSVRSMDFVV------------TDGR 89   Amycolatopsis...
WP_016337619   29 APGAPGAHPsWL-PADKTGFGTARE----QVSNVWFTLQ-GGRMSEVYYPDLSTPAVRALDLVV------------TDGT 90   Amycolatopsis...
WP_006054303  764 TRRDDAADTIERRAEMAEDDALLFRHVITEsgdgRGHEWTLTVEYATDPEHDALLADISFe-----ATDDNEYDLFAVAD 838  Halogeometric...
WP_015795713  101 TFSDLQTRDMTYTVAADS-TGMECTVTSTD----AKHGFELVTTYVTDPQRDSVLMNTRIaptqgsKTRVGALKVYARLD 175  Catenulispora...
WP_013226430   93 TFVDLERDATNHVVTVPDEKALQYTITNTA----KSGKYRITTDYVTDPARATLVTNTRFq-----SLDGGSYRLYLLAN 163  Amycolatopsis...
WP_015795712  109 SFTDGEATNTKHAIALADPASLTFTQTNTA----ASGKYAITKTYVADPARSVILVKTTFt-----NNGSTPLYLYADYL 179  Catenulispora...
WP_016335117   95 GFTQLERDHTTKQLVLTDPRSLSYRQINTA----TNGRYRITKTHTADPARSTVLIQTRFe-----VLSGGPLQLYALYN 165  Amycolatopsis...
WP_011875007   95 GFVQRLSDVPT-RTEPVDPKTPSYRQVSTG------QGWEATATYVTDPARPSVVVDLQVr-----SLDGKPLQTYVLHE 162  Saccharopolys...
WP_015621701  144 GHAVRANAAATVRTTLIDERSLSYRQTFTE----RAHRWHLTTTYTSDPARSTVLINVSF--------TGRGYDLFTVYD 211  Actinoplanes ...
WP_014443803   99 GVA----RMPQPSTELTSDRSLSYRQTWED----PAGRWRLVADYTVDPDAAVLLVRVRL--------SGHGHRLYTIYD 162  Actinoplanes ...
WP_013230293   90 SFAVTDYSAKSQQVRRTGDDSLTYEQTVTD----DQHRWRLRKTYVTDPAATTVLVDVDFq-----SLTGRPYQLYAVAD 160  Amycolatopsis...
WP_016337619   91 SFATVDSSAKAQQVRRTG--GLTYEQTITD----DHRRWKLRKTYVTDPARASVLIDVDFv-----SLTGRPYQVYAVAD 159  Amycolatopsis...
WP_006054303  839 TALVNTGGE-------DRGLRlGQMGSYHLVARDagpydqqgktrpllidrEgneySVAIAMTA-----AGRFDWGTVGV 906  Halogeometric...
WP_015795713  176 AHVNGDGGGgaqnaggNTGVVdAHTGIPVIDSTNtttq----------aanRsyavPTYMAMTSagqagEAKQ-RASVGY 244  Catenulispora...
WP_013226430  164 PSMAGGGAN-------DNAWWd---STGALMASGtet------------lfGgtatTVVSALRV-----STGFTAHDNGY 216  Amycolatopsis...
WP_015795712  180 PQLNNQGMG-------NIGSTd---AGGDLVASN-----------------G----PMASALAA-----STPFSSASTGY 223  Catenulispora...
WP_016335117  166 PSLNNSGMG-------DTGAT----SGGQLVASD-----------------G----PVSSALAA-----STGFVKATSGY 208  Amycolatopsis...
WP_011875007  163 PTLTKDGSD-------DRSRT----EGATLVASD-----------------R----SAASALRA-----TPAFTETSSGY 205  Saccharopolys...
WP_015621701  212 PALANTRAG-------DSGRT----AGSTLVATD-----------------G----STASALVA-----SPAFTATSNGF 254  Actinoplanes ...
WP_014443803  163 PALNNSRGG-------DSGRT----EGNALIATD-----------------G----PVTSALVA-----KPGFTATSNGF 205  Actinoplanes ...
WP_013230293  161 PDLTNDGSD-------DSAAR----SGDALTAQD-----------------A----TNAAALTA-----QPAFTTTSVGY 203  Amycolatopsis...
WP_016337619  160 PDLTNEGSD-------DSARA----DGASAVSSD-----------------A----KTAAALAA-----EPAFSRTSVGY 202  Amycolatopsis...
WP_006054303  907 AG--SDHLSELFSEGELPNAQESVD-NENVVLVGRIGS--GTNLGETIALGFAEHADTAAAlgEAAGALTRGYETVRTSY 981  Halogeometric...
WP_015795713  245 EGtaSDGLTQLDSSHTLTQTTSAA--DGHITATEDVTP--RHGTDFTLALGFGRTQQQSVQ--TATASLRAPFEVTAHAY 318  Catenulispora...
WP_013226430  217 SGaaSDCLVDLRADKTLTNQFDAVSgTGNVVQCGQIPV--GTDTTFTVAQGYGDTTAAATS--AASGSLSSGFTAVASSY 292  Amycolatopsis...
WP_015795712  224 VGtaSSGTAQLATGHTLGTVYSGVSsSGHIDQTAQIPVaaSGSTTFTLALGFDTTSAAAVS--DVSASLSSGFAAVQSSF 301  Catenulispora...
WP_016335117  209 SGtaSDGYVDLSGDHVLGAQYDSAStPGNLVQLGQIPV--GTDTTFTLAVGFGSDRGAASA--NASASLAGGFASADTAY 284  Amycolatopsis...
WP_011875007  206 LGa-SDGWTDLSRHKRLTAHHPEAG-AGHVGQVGRLPVdgVGTSHAVLTLGYGKHASEAVA--TAEETERTGFEAAARAY 281  Saccharopolys...
WP_015621701  255 RGv-SDGWTDLLTDGRMDWHYQSTG-DGNLVQTAAIN------PHTTLALGFGTPATAAA---TARASLRRGFGAVARDY 323  Actinoplanes ...
WP_014443803  206 AGt-SDGWTDLA-DGRMDWRYASAS-AGNLVQTAAVA------PESTLALGFGSSALR-----DASAVLHRGFAGVDRSY 271  Actinoplanes ...
WP_013230293  204 AGa-SDGNTQLTKTFKLD-RYDTAA-KGNVVLTGRTNAdgVRDRHVTVALGMGAKAADALK--SAQASQRRGFRDIARAY 278  Amycolatopsis...
WP_016337619  203 SGs-SDGITQLTKSFSLK-DYATAA-KGNVLITGQTSAdgVRSRDFTLSLGMGAKDTDALA--NAKASLRRGFADAARAY 277  Amycolatopsis...
WP_006054303  982 ADSWAEFLA 990  Halogeometricum borinquense
WP_015795713  319 ADTWGAYDR 327  Catenulispora acidiphila
WP_013226430  293 RSGWNAYVN 301  Amycolatopsis mediterranei
WP_015795712  302 QAGWHTWMS 310  Catenulispora acidiphila
WP_016335117  285 RSGWSGYLS 293  Amycolatopsis keratiniphila
WP_011875007  282 GEGWHRYAD 290  Saccharopolyspora
WP_015621701  324 AYGWHRYLG 332  Actinoplanes sp. N902-109
WP_014443803  272 ARGWGSYLR 280  Actinoplanes missouriensis
WP_013230293  279 DRGWQQYLR 287  Amycolatopsis mediterranei
WP_016337619  278 DRGWKQYLR 286  Amycolatopsis keratiniphila
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