Conserved Protein Domain Family
MiAMP1

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pfam09117: MiAMP1 
MiAMP1
MiAMP1 is a highly basic protein from the nut kernel of Macadamia integrifolia which inhibits the growth of several microbial plant pathogens in vitro while having no effect on mammalian or plant cells. It consists of eight beta-strands which are arranged in two Greek key motifs. These Greek key motifs then associate to form a Greek key beta-barrel.
Statistics
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PSSM-Id: 370303
View PSSM: pfam09117
Aligned: 7 rows
Threshold Bit Score: 111.458
Threshold Setting Gi: 300149530
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_002962269  20 SYFDVYFGPGCHNDMQHYSVCGCLniHPSYHGGFKFVYEGQ---PIRTYNQPFCQDEVSTTIStirQAttmysCNQvFQF 96  Selaginella moe...
EFJ16185       5 SYFDAWAGPGGNNRLERYRACGCTnvGASQHGGYSVVYLGH---AAAAYNTANCQGVAQRWFR---RH-----CSG-FRW 72  Selaginella moe...
EFJ16963       7 SFFDAWAGPGCNNRLERYRACGCNnvGASQHGGYSFAYQGQ---TAAAYNTANCRGVAHTRFSssvQD-----CSG-FGW 77  Selaginella moe...
ERN04793      23 SSLTVWAGPGCNNRAERYSKCGCS--GIHLKGGYEFVYNGQ---TAALYNQPDCKGVAHTRFGsgaRS-----CNA-FGW 91  Amborella trich...
EFJ05168      26 STFVTFQSPDCTNRV-LVTRCGCN--NLDASVGYGFEWHKQresTANLYNQPDCKGSPHTSLDssvSA-----CGP-IGW 96  Selaginella moe...
XP_002446987  38 SSLTTWSGADCSGDTSTIGACGCT--DLVFYAGQEFYYRGQ---TATLYTGTGCAGTPYQVFEd-tQA-----CGD-FGW 105 sorghum
RCV35090      30 SHLTSWAGPGCSGQTAIAGSCGCS--NLQFYDGQEKSYQGQ---TARLYTETGCAGTSYLVFEd-tQA-----CGD-FGW 97  foxtail millet
XP_002962269  97 QSIFFQC 103 Selaginella moellendorffii
EFJ16185      73 NSIFIQC 79  Selaginella moellendorffii
EFJ16963      78 RSIFIQC 84  Selaginella moellendorffii
ERN04793      92 KSMFIQC 98  Amborella trichopoda
EFJ05168      97 KSIEISC 103 Selaginella moellendorffii
XP_002446987 106 RSINIHC 112 sorghum
RCV35090      98 RSISIDC 104 foxtail millet
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