4QHB


Conserved Protein Domain Family
N-glycanase_N

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pfam09112: N-glycanase_N (This model is not part of the current CDD release)
Peptide-N-glycosidase F, N terminal
Members of this family adopt an eight-stranded antiparallel beta jelly roll configuration, with the beta strands arranged into two sheets. They are similar in topology to many viral capsid proteins, as well as lectins and several glucanases. The domain allows the protein to bind sugars and catalyzes the complete removal of N-linked oligosaccharide chains from glycoproteins.
Statistics
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PSSM-Id: 490133
Aligned: 24 rows
Threshold Bit Score: 94.8071
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4QHB_C          14 HIQVFDKTPVCFrpdsfpNYTpANADG-----VIRLVNGRIILKKITLP---DYKRDVDVTLKVTVASNG------DRWD 79  Phocaeicola v...
XP_002110158   348 VVQIFNDS------------------------TIHGKYGASAI--VNLP---PVKEYQDVQLDMALSCRGkrdeecPPWD 398
2_pfamImport     1 VVNIFNDT------------------------IMQGDKGAVAT--VELPk--DISSFDKLELDAALSCPGtrdktcPHWD 52 
XP_015213582   392 AITVFNHT------------------------VMQGENGTVTT--VELPk--DFLASDSLELDASLSCPGlkdetcAPWD 443
1_pfamImport     1 VVSVFAKV------------------------QMQGEEGAVAT--VDLPp--DLWEFRTLELDASLSCPGrrdsscPPWD 52 
XP_005799515   364 IIPVFDQV------------------------TMQGDKGAVAT--VELPa--DVWDSDTLELDASLSCPGrrdsscAEWD 415
5_pfamImport     1 VVPVFDRV------------------------LMQGEAGAQAV--VDLPp--DLLRYDVLELDAALSCPGlrdetcAHWD 52 
XP_699984      370 TVSVFDHH------------------------DMHGNAGAHAV--VDLPa--DISPYDVLELDTSLSCPGrrdetcAHWD 421
jgi:Fluta_0311  61 TINIMNDVVFF-------DGYaSVVSDptpagVIRFRND-LMAKQITSQqldMIGNQLTINITISALC--------DNYD 124
WP_008584217   209 TIPLFTHQVINF------SDTtKSTGD-----IMRFASGTIVVKKIKMP---VIDSGSSAFLDVTEQSNG------DAYD 268 Niabella soli
4QHB_C          80 KSGSCFVLPK-ESVINLXN-IAEgKRAFPAVDStKYEKXIGIVPGQDYVPTLELXRFXTPF--GVGYYSSdndslsskrR 155 Phocaeicola v...
XP_002110158   399 HTVQLYVCCS----------------------------------NATSHCQQELGRWITSFrrRIG-------------- 430
2_pfamImport    53 HTVQLYVCCE----------------------------------NDTSYCNLELGRWITAFcrRIG-------------- 84 
XP_015213582   444 HTVQLYVCCD----------------------------------GLSQLCNLELGRWITAFhrGIG-------------- 475
1_pfamImport    53 HTVQLFVCCD----------------------------------RLSPFCNTELGRWITAF--RRG-------------- 82 
XP_005799515   416 HTVQLFVCCD----------------------------------QLSPYCNTELGRWITAFrrGTG-------------- 447
5_pfamImport    53 HTVQLFVCCD----------------------------------RFSPHCNQELGRWITAFrrGTG-------------- 84 
XP_699984      422 HTVQLFVCCN----------------------------------DSSPYCNQELGRWVTAFrrGTG-------------- 453
jgi:Fluta_0311 125 RIGGVNLAMVpKGSTTY---------------------------NPDAVGRIEVGRFITPF------------------- 158
WP_008584217   269 RTGTVFLIPV-DKKQSFLDgLKNgVNTLPIYTNgNGKKYQGVIATPDYNPLIELMRFFTPF--GIKQFNQ---------N 336 Niabella soli
4QHB_C         156 PVYIPKWEKSVTWVQDITDLYPAL----EREAY-----VGIYIDTWTAEGYVASXELDV 205 Phocaeicola vulgatus ATCC 8482
XP_002110158   431 -----------HWLTPVTPLLPLLs---SSSCN-----FTMKTVPW-AQPWFTTLKLRF 469
2_pfamImport    85 -----------RWLTDVSPLIPLLn---STKCT-----FRMKTVPW-AMAWMPSLNLRF 123
XP_015213582   476 -----------RWLTDVSPLMPLLn---STKCT-----FSMKTVPW-AKPWVASLNLRF 514
1_pfamImport    83 ---------SGRWLTDVSPLLPLL----DGRCT-----FTMKTVPW-AKPWVASLNLRF 122
XP_005799515   448 -----------HWLTDVSPLIPVLd---SSKCT-----FTMKTVPW-AMPWVASLNLRF 486
5_pfamImport    85 -----------RWLTDVSPLLALLn---GERCS-----LTMKTVPW-AMPWMTSLNLRF 123
XP_699984      454 -----------HWLTDVSALIPLLn---NKKCS-----FTMKTAPW-AMPWMTTLNLRF 492
jgi:Fluta_0311 159 -MNKNVSPTSVPYTFVVDNVAQILnsseLNALYdfwleLEVFGVPYAANTQVAgcsgrn 216
WP_008584217   337 AIKGKQWQEAAPYRQDITDFIPLLs---NKEVY-----IGVFIGNYDKGGHKITANITV 387 Niabella soli
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