5LZC


Conserved Protein Domain Family
SelB-wing_2
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pfam09106: SelB-wing_2 (This model is not part of the current CDD release)
Elongation factor SelB, winged helix
Members of this family adopt a winged-helix fold, with an alpha/beta structure consisting of three alpha-helices and a twisted three-stranded antiparallel beta-sheet, with an alpha-beta-alpha-alpha-beta-beta connectivity. They are involved in both DNA and RNA binding.
Links
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Statistics
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PSSM-Id: 518690
Aligned: 113 rows
Threshold Bit Score: 32.1154
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
5LZC_z                   426 TLATYHEQHRDEPGPGRERLRRM-AL--PMEDEALVLLLIEKMRESGDIHSHHGWLHL 480 Escherichia coli
WP_014163289             463 ILKEYHEMEPESNGLPYELLFQR-TS--LRFPLRAARKITDKLIEEGILKETSGKVsi 517 Thermovirga lienii
WP_013910064             450 TLKEYHKNNPFSPGLTKELLKMRiSSfiPDVF---LNYVIDELIQKGILNKEKEILfl 504 Thermodesulfobacterium ge...
BAF87151                 445 TLDTFHADNPDLPGIGIERLRMQ-AE--PRLPAPAFKAALQALAQAREIALDGAWVRr 499
MSU:OCAR_5165            445 ILTVFHADYLNLPGMGLERLRLQ-LE--PRLAAPVFIAFLQGLARNKELALDGAWVRL 499
Q931D5                   445 VLSAFHVENPDLQGIGRERLRLQ-VT--PRLPPPAFLVALRAEQTAGRLVLEGAFVRL 499 Sinorhizobium meliloti
WP_011749100             441 ELAAFHAENADLQGLGREKLRLS-LD--PRLPKPDFAAFLRAEAAAGRIALDGAFIRL 495 Paracoccus denitrificans
PRJNA212980:JCM7686_3474 468 TLQTHHTENPDLQGLAREAMRLR-LS--PRLPGPVFTSFIRAEASAGRIALDGPFLRL 522
jgi:Msil_3332            446 RLSAFHIENPDLQGIGREKLRLF-LL--PRLPAPAFLAALQKAAREMAIALDGSFVRL 500
CCB66146                 446 RITQFHTDNPDLQGIGREQLRLL-LE--PRLSKSVFAVALYKISEKGEIALDGAFVRL 500
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