4RR6


Conserved Protein Domain Family
tRNA-Thr_ED

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pfam08915: tRNA-Thr_ED (This model is not part of the current CDD release)
Archaea-specific editing domain of threonyl-tRNA synthetase
Archaea-specific editing domain of threonyl-tRNA synthetase, with marked structural similarity to D-amino acids deacylases found in eubacteria and eukaryotes. This domain can bind D-amino acids, and ensures high fidelity during translation. It is especially responsible for removing incorrectly attached serine from tRNA-Thr. The domain forms a fold that can be be defined as two layers of beta-sheets (a three-stranded sheet and a five-stranded sheet), with two alpha-helices located adjacent to the five-stranded sheet.
Statistics
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PSSM-Id: 518568
Aligned: 72 rows
Threshold Bit Score: 158.082
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4RR6_A         1 MRLLYLHADRFEYKTVKPALKNPPDPPGEASF-GEALVVFTTVEDGDGPq---TVMYAASDIASHSSRLKVTTVILYPYA 76  Aeropyrum perni...
WP_012663148   3 MRVLFWYCDNFDWNPAIKTIEEVPDAQPFGC--TNAVVAFIHVEPKDLDpassAETKLVKNSKWLARKWSVNQIVLHSFT 80  Desulforapulum ...
WP_006930409   1 MRLLMIYCTKFAYKTSVKGLEQVDELHESAQF-ENALVGFIHVEPDDEQhlstVQTKLVKNLKWAARKNETNRIVLHSFA 79  Caldithrix abyssi
WP_013908036   1 MKIIMFYALEFSWKPYQKVLDSGEDTPKETSL-SKTVVVFYQVEAEDPArekkVVEKLIKNIKWLARKFDTKAVVLHSFN 79  Thermodesulfata...
WP_014260807   1 MKLLMFYAPEFWHKPFQKTLPEAPEAEPTGAMaRDAVVVFYHGEAEDHDrrssVLSKMLKNIKWLGGKFNTKQVVLHSFG 80  Desulfocurvibac...
WP_013258214   1 MKLLMFYAPSFWFKTHEKALAEAPEADIEQTV-EHAVVVFYQVEAHDVDdqtaTINKTIKNIKWLSRKFQAGAVVLHSFN 79  Desulfarculus b...
WP_011697057   1 MKLLMFHAPEFWFKTFDKAIPDAPDCKEEKSF-RQAVVIFYQVEGEDVGredgIVSKWVKNAKWIAGKFATRTVILHSFN 79  Syntrophobacter...
WP_013036622   1 MKMLLFDTEYFWFDTFSKTLENVEDIKKEEKI-ENTAVVFIHVELEDEErknkVVKNAVKTFKWYLNKVDKEKIVLHSFA 79  Methanohalophil...
WP_012107602   1 MKLLMFDTNEFWYKPFQKTLETAQTAVDEAAF-ADSLVIFVNVEEEDELqkdkSIRKAAENILWLAKKTGRTKVVLHSFA 79  Methanoregula b...
WP_236610440  15 MKLLMFNTHEFWFRTFKNSLNEDNDEDIEKTV-ENSLVIFIHIEENDIErkerLVKKATDNITWLAKKTGRKRVVLHSFA 93  Methanosphaerul...
4RR6_A        77 HLSSRLAKPMAAHKRLIELEGALRTKfPGHVHRAPFGWYKSFSIACKGHPLAELSRS 133 Aeropyrum pernix K1
WP_012663148  81 HLGEEKADPDMAQAVLNNAQVRLETS-GYDTIQTPYGYFLDLSIKAKGHPLARIYKE 136 Desulforapulum autotrophicum
WP_006930409  80 HLSEEKGDPELTKKIFDNAEERLKSA-GYETAQTPFGYFLDIDVQAPGHSFARLFKE 135 Caldithrix abyssi
WP_013908036  80 HLSSSKASPEESYAIIEKAKEKLKRT-GFNIYETPFGWLNEWKMHVAGESLAKVFKE 135 Thermodesulfatator indicus
WP_014260807  81 HLSESKADPEFVRELVAEVRQRLENT-GYSVGETPFGYLNEWKLHVAGDSLAKVFKS 136 Desulfocurvibacter africanus
WP_013258214  80 HLSASKAPPQAAQALMEAAAQRLAAV-GLTVQQTPFGYLNEWRLHAAGPALAKVFKE 135 Desulfarculus baarsii
WP_011697057  80 HLSLSKAPPETAHRLAAQVRGRLERA-GFSVFETPFGYLNEWKLHVSGESLAKVFKE 135 Syntrophobacter fumaroxidans
WP_013036622  80 HLSSSTSSPEFAAEIISEIKEKLINK-GIEVHTTPFGYFSEFSIHVRGESLAKIFKE 135 Methanohalophilus mahii
WP_012107602  80 HLSESKSGIGFAEAALQGIRDRLAAK-GLTVAITPFGYFLEFKIHVKGESLAKVWKS 135 Methanoregula boonei
WP_236610440  94 HLSDSKSESTGAQDIFLALQEKLISR-GLDTTMTPFGYLNEFRIQVLGDSLAKVWKS 149 Methanosphaerula palustris
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