Conserved Protein Domain Family
DUF1842

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pfam08896: DUF1842 
Domain of unknown function (DUF1842)
This domain is found at the N-terminus of proteins that are functionally uncharacterized.
Statistics
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PSSM-Id: 401005
View PSSM: pfam08896
Aligned: 9 rows
Threshold Bit Score: 115.174
Threshold Setting Gi: 380503168
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
DSMZ:MSR1_20360  30 GLFQACYQVGGA-MPGAPAVNLHLAVNTPAQAVNGMGQITQATNPPLNEASTVSGNYSVMTVMP-----NNTHIQVRLTG 103 Magnetospiri...
Q4KES3            4 GLFHTRLIVANP-VIGGPVLTLDLLVDTPKKRVSGVARVTQSTSPPVQFHADVWGDYSQVKLDPs----SEGHIILSLAG 78  Pseudomonas ...
Q8XYN1            5 GLFPVTYVVATP-AIGAPVLTLSLLVNTPAKKVSGIAKITQSTNPPLVFHADVWGTFSQLRVEEg----AEASIILTLDG 79  Ralstonia so...
Q63NT6            5 GLFPVQLRVATP-NLGAPVLWLNLLVNTVEKTASGFARITQTVYPPMHFRARVVGPFHQMRIDPh----APQSVTLTLSG 79  Burkholderia...
Q7NZQ3           11 GLFIVSYNVFKPgVAGGYNLHLQLSVYPPARQVSGRAVITQALQHPLIFENPVQGRYEE----------KGGDIELFLNG 80  Chromobacter...
Q8XYN2            8 GLFPVSYVVGTG-LPGAPTLRLNLLVDTPRRKVVGNATVTQAVSPPLDLHVDVWGEFTYMALMPp----HGTRILVTVQG 82  Ralstonia so...
Q4KES2           10 GLFPLSYRIGTS-QPGAPTLILNLLAYTPEHSVRGTSSITQAVNPPLDLHSDVWGQYTYLTVMPp----STSKILITAQG 84  Pseudomonas ...
Q63NT7            8 GLFPVRYLVGTG-LPGAPQLVLDLMVDTVDHSVVGRAAVSQAVSPPLNFHADVWGSYVFRLGPPprrdgSGAIVQISLQG 86  Burkholderia...
CCG54210          9 GAYLAQGTIGNVgMPGAPIVHFSFVVVPSQHKVSGAVQITQATE-NGNYSGQVTGTLYATGL-------GNVTQIVAVKG 80  Flavobacteri...
DSMZ:MSR1_20360 104 YPPvnwppqagiGPVIPA--NLDMIMVLSKDWKS---GDAQYQYRT 144 Magnetospirillum gryphiswaldense MSR-1
Q4KES3           79 NPS---------GPTSQIaeTFHLQGILGLDWAS---GFASYKYQF 112 Pseudomonas protegens Pf-5
Q8XYN1           80 NPS---------GQTSMIaeTFHLHGILSSNWQT---GQASYRYEE 113 Ralstonia solanacearum
Q63NT6           80 SPT---------GPVAPQvvILELNALLNEGWQS---GTANYRYFY 113 Burkholderia pseudomallei
Q7NZQ3           81 FRLp-------iDPASPRvgDFHFDGHLKGGWHAengSRARYAFLQ 119 Chromobacterium violaceum
Q8XYN2           83 NSG---------GPTSNAmtTFRLHMVVGADWQA---GIASYSYWS 116 Ralstonia solanacearum
Q4KES2           85 NQG---------GPGSNSviNFKLHLVVSDDWKE---GVANYQYYN 118 Pseudomonas protegens Pf-5
Q63NT7           87 NQG---------GPQSNSmiTFYGELLLKGDGKT---GVASYRYYS 120 Burkholderia pseudomallei
CCG54210         81 TIHs--------EGVMPIeiPFEAHLAIDGSWN----GTGGFSYAN 114 Flavobacterium indicum GPTSA100-9 = DSM 17447
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