Conserved Protein Domain Family
YolD

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pfam08863: YolD (This model is not part of the current CDD release)
YolD-like protein
Members of this family are functionally uncharacterized. However it has been predicted that these proteins are functionally equivalent to the UmuD subunit of polymerase V from gram-negative bacteria. This family has been shown to belong to the WYL-like superfamily.
Statistics
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PSSM-Id: 489947
Aligned: 35 rows
Threshold Bit Score: 70.6722
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q5WIB2        29 MLPEHKQAWIEMQKDENKVElHG-ELDDDQWRAIGKVVMDALNHTLVVRLTYWQDGYYIDKDCYIYKVDELNKRVRIEYG 107 Bacillus clausi...
Q8EP51        13 MLPEHVEYLRKKKKESQKIS-KP-VIDAQQLDYMEQQLQFATINNSSITITYYDDGEMQTTTCQASNIKVTKKHLQLNMD 90  Oceanobacillus ...
WP_015891970  19 VLPEHREMYLRIKEEERRYV-PP-ELDQEQLSALSELVWQAFQTESILTLTYYDGREPRRLSAHIIHIDQAARRLKLRAG 96  Brevibacillus
Q65KE1        15 FLPEHIASLRKLKSEIDHAYeRKpSIDPEQWSDFESKIQYAYRTGQDCEIRYWRNWVAERVSGVIESVDPVGGTLRIEGV 94  Bacillus lichen...
Q81E46        22 SIPEQYEEIHRMFEEQYKVP-KP-FLTQDTMERIERALMQSFHEEEEIHISYYRDGMVQDMYINVLHIEPMTKTIYCTDA 99  Bacillus cereus...
Q81DS8        18 VMSEQLLNMRKIIGEKLKVQ-KP-LLTNEAKERISDKLLTSLLSEKEILVTYFEDGYILTSYMTVVHINPVKQIVICTDA 95  Bacillus cereus...
Q9RMW4        20 ALTSQFDGIREIIKEQNKVT-RP-ILTTAEKERIENILLCSLLSEEEILITYYEDGYLLSGYMTVVDIDPLNSAVICTDA 97  Bacillus anthracis
1_pfamImport   1 AMPEQFVGIREMIKEKTKVA-RP-ILTSEEKELIENMLLCSLLSEEEILITYYEDGYLLTNYMTVIDIYPLHSSIICTDA 78 
2_pfamImport   1 TMPEQFLDVKRQIDAQTKIE-RP-ELSEDRLQEINEVLHSALSKQQPVYIDYYIDGTIQHTKMYIEKVDQWAAIIIGTTV 78 
Q2FWX7        36 TLPEQFETIQQYIIDQNKIT-RP-VLSDDQLAELNIRLHEALQYAQPVEVKFYNNGFVDSVRLTIYRIDAINYEIDGYVY 113 Staphylococcus ...
Q5WIB2       108 PSDDStreWIDMRVIYDVQ 126 Bacillus clausii KSM-K16
Q8EP51        91 NDTL----EFPLNNLLNIE 105 Oceanobacillus iheyensis
WP_015891970  97 SDIH----WVPFARLLHVE 111 Brevibacillus
Q65KE1        95 --------DIPFREIVWVA 105 Bacillus licheniformis DSM 13 = ATCC 14580
Q81E46       100 FGLNT---KFKFDELVNIN 115 Bacillus cereus ATCC 14579
Q81DS8        96 FYKTY---VFNAMDIIEIM 111 Bacillus cereus ATCC 14579
Q9RMW4        98 FYNTM---KLQFSNIIDVK 113 Bacillus anthracis
1_pfamImport  79 FYNKM---TIQFSNIIDVK 94 
2_pfamImport  79 NEGHTy--FVSFLDIVNLE 95 
Q2FWX7       114 NQQQRq--KISIFDILDIV 130 Staphylococcus aureus subsp. aureus NCTC 8325
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