Conserved Protein Domain Family
YolD

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pfam08863: YolD (This model is not part of the current CDD release)
YolD-like protein
Members of this family are functionally uncharacterised. However it has been predicted that these proteins are functionally equivalent to the UmuD subunit of polymerase V from gram-negative bacteria. This family has been shown to belong to the WYL-like superfamily.
Statistics
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PSSM-Id: 518545
Aligned: 35 rows
Threshold Bit Score: 71.0608
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q5WIB2        29 MLPEHKQAWIEMQKDENKVElHGELDDDQWRAIGKVVMDALNHTLVVRLTYWQDGYYIDKDCYIYKVDELNKRVRIEYGP 108 Bacillus clausi...
Q8EP51        13 MLPEHVEYLRKKKKESQKIS-KPVIDAQQLDYMEQQLQFATINNSSITITYYDDGEMQTTTCQASNIKVTKKHLQLNMDN 91  Oceanobacillus ...
3_pfamImport   1 VLPEHREMYLRIKEEERRYV-PPELDQEQLSALSELVWQAFQTESILTLTYYDGREPRRLSAHIIHIDQAARRLKLRAGS 79 
4_pfamImport   1 ILPEHREAYLRLMKEQGRRG-KPTLDDQEIQQIEQAIIVSYNERKPITLRVFNPFDDEELCGLVTVINTSRREVKLSRGE 79 
Q81E46        22 SIPEQYEEIHRMFEEQYKVP-KPFLTQDTMERIERALMQSFHEEEEIHISYYRDGMVQDMYINVLHIEPMTKTIYCTDAF 100 Bacillus cereus...
Q81DS8        18 VMSEQLLNMRKIIGEKLKVQ-KPLLTNEAKERISDKLLTSLLSEKEILVTYFEDGYILTSYMTVVHINPVKQIVICTDAF 96  Bacillus cereus...
Q9RMW4        20 ALTSQFDGIREIIKEQNKVT-RPILTTAEKERIENILLCSLLSEEEILITYYEDGYLLSGYMTVVDIDPLNSAVICTDAF 98  Bacillus anthracis
2_pfamImport   1 AMPEQFVGIREMIKEKTKVA-RPILTSEEKELIENMLLCSLLSEEEILITYYEDGYLLTNYMTVIDIYPLHSSIICTDAF 79 
WP_260851272  37 TMPKQFLDVKRQIDAQTKIE-RPELSEDRLQEINEVLHSALSKQQPVYIDYYIDGTVQHTKMYIEKVDQWAAIIIGTTVN 115 Macrococcoides ...
Q2FWX7        36 TLPEQFETIQQYIIDQNKIT-RPVLSDDQLAELNIRLHEALQYAQPVEVKFYNNGFVDSVRLTIYRIDAINYEIDGYVYN 114 Staphylococcus ...
Q5WIB2       109 SDDStreWIDMRVIYDVQ 126 Bacillus clausii KSM-K16
Q8EP51        92 DTL----EFPLNNLLNIE 105 Oceanobacillus iheyensis
3_pfamImport  80 DIH----WVPFARLLHVE 93 
4_pfamImport  80 EDFS---WIKLEEIIEAD 94 
Q81E46       101 GLNT---KFKFDELVNIN 115 Bacillus cereus ATCC 14579
Q81DS8        97 YKTY---VFNAMDIIEIM 111 Bacillus cereus ATCC 14579
Q9RMW4        99 YNTM---KLQFSNIIDVK 113 Bacillus anthracis
2_pfamImport  80 YNKM---TIQFSNIIDVK 94 
WP_260851272 116 EGHTy--FVSFLDIVNLK 131 Macrococcoides caseolyticum
Q2FWX7       115 QQQRq--KISIFDILDIV 130 Staphylococcus aureus subsp. aureus NCTC 8325
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