6Y56


Conserved Protein Domain Family
AbiEii

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pfam08843: AbiEii (This model is not part of the current CDD release)
Nucleotidyl transferase AbiEii toxin, Type IV TA system
This family was recently identified as belonging to the nucleotidyltransferase superfamily. AbiEii is the cognate toxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.
Statistics
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PSSM-Id: 518537
Aligned: 166 rows
Threshold Bit Score: 35.6367
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6Y56_A        30 HLLYLl--sQtvQFGDNRLVFKGGTSLRKCrLGnVGRFSTDLDFS----APDDEVVLEVCELIDGARVGGFEfgvQSTr- 102 Mycobacterium t...
WP_007352454  13 SVLEAmn-pE--LLKDLQCFFCGGTAIALQ-LN-DFRKSVDIDFV----CSGVDGYRELRGLVGQYSMTGLSalfDRPvp 83  Marinobacter sp...
WP_237706365  28 TVLAAld-aD--VLVANDCLFGGGTAMALR-YG-EYRESVDIDFL----VSRVEGYRQLRQRLTGPEGMRALsrpGHTln 98  Methylibium pet...
WP_011799804  12 QVLRAln-aP--LLRENLCLFGGGTAIALR-YG-EYRESVDMDFL----VSSLASYRNLRQLLTNPGGIAGIvhaQAApl 82  Polaromonas nap...
Q5QWW7        14 RCLDNfn-sH--YLTEHAILFGGGTRIALE-LS-EYRESVDIDFLc---RDKKSFRAVREQVTNRTLGELVKedfIYSrd 85  Idiomarina loih...
Q0AYA4        12 PILDRlvecD--ILTDRGFYLAGGTALAIQ-LG--HRISVDLDFFsvddFEPQNLLISLNESLGEIKVINMSkgtLNFv- 85  Syntrophomonas ...
Q93P81        17 QFMSA--------EVFKTFRLVGGTALSLQ-VG--HRKSVDIDLF----SDVDYGKIDFEEIEAYLNENFAYvdhLSKfd 81  Microscilla sp....
WP_011584401  17 KLMQA--------DEFKDFRLVGGTALSLH-IG--HRMSIDIDLFtd-aEYSSVDFERIEKFLINTFRFVHGdfgNKKg- 83  Cytophaga hutch...
WP_008237788  16 VLMQE--------PIFKHFRLVGGTALSLQ-FG--HRISVDIDLFtd-aIYGSIDFKIIEQYMLNNFTYVSTnfgVNPa- 82  Pedobacter sp. ...
Q138J1        18 QIWRSl---E--PAGDLNFVLYGGTAVALH-LG--HRISIDFDFF----RSQPLDKSELAEAFPLIKDAAII-------- 77  Rhodopseudomona...
6Y56_A       103 --------gDGRHWQLRvrhteLGEPRIVASVEFARRPLALPSEllaFIQLPIHKAYGfGLPTLPVVAEAEACAEKLar- 173 Mycobacterium t...
WP_007352454  84 qlr-evradRYGIRSV------LDVGGVPVKFEV------IRED---RISLDASFEQL---HGVPLIARADAYAHKLlan 144 Marinobacter sp...
WP_237706365  99 qar-evradQYGLRTM------LQVDGADIKFEIVLESRI-------ELEAPGADDRQ---CGVATLTPLDMVTSKLlan 161 Methylibium pet...
WP_011799804  83 eqikevradQYGIRTL------LRVDGQPIKFEIILEGRI-------QLAAPTAKDEV---CGVATLSPLDMAASKLlan 146 Polaromonas nap...
Q5QWW7        86 i-----sfdRYGVRTF------LDVDGVRIKLEF------VAFD---NYALEQGDDAD--LFNVPFIDRTSCFITKLlan 143 Idiomarina loih...
Q0AYA4        86 --------iNGEKVSF---------------IR-------YPYK---NIYLPLDFRGC------PIADYRDIGATKLmt- 125 Syntrophomonas ...
Q93P81        82 -------pgMGKAYFV------GSNSNDAIKLDVFYTDSF---------IQPAYIEDT-----IRMATIEEIIAMKLdi- 133 Microscilla sp....
WP_011584401  84 ---------MGKSYLI------GTDLEHAVKLD----------V---YYSMDPFFQNTvEADGLRMASIEEIIAMKIdv- 134 Cytophaga hutch...
WP_008237788  83 ---------FGTSYLV------GSDSQNAVKVDIYYSM--DPF-------FQPAIETE----GLRMASTEEILAMKIdv- 133 Pedobacter sp. ...
Q138J1        78 ---------QEDKNTLVf---nSGVPSGRVKLSFFGG---LGLG---RINPPLKTTDA----VLLVASPEDLLATKLka- 134 Rhodopseudomona...
6Y56_A       174 ---yrRVAL-ARDLYDLNHFAS-RTIDEPLvrRLWVLKVwgdvvdDRRGT------------RPlrvedvlaarsehDFQ 236 Mycobacterium t...
WP_007352454 145 sdrwgDRSVlSRDIIDLAVMVR-SWGHVPL--AAEQKVR------EAYGD------------------------------ 185 Marinobacter sp...
WP_237706365 162 sdrwrDDAVmSRDLIDLAMMAPpKALMKRAmaKAQGAYG------DSVAAdlaravedlrarPH-------------HLD 222 Methylibium pet...
WP_011799804 147 sdrwgDDGVfNRDVIDLAMMKPs--------lALLRQAL------LKAHG---------------------------AYG 185 Polaromonas nap...
Q5QWW7       144 adrwmQKPY--KDIFDLIVMFE-NWGEIPP--EAYAEAH------THYGV---------------------------QVV 185 Idiomarina loih...
Q0AYA4       126 ---isQRGL-IRDFYDLDAVIQ-TGISFAQivAIMEEKY------PTVKT------------VM-------------PHI 169 Syntrophomonas ...
Q93P81       134 ---vqRGAR-KKDFWDLHELLDtYSIDQML--SLHEQRY------PYGHD-------------R-------------DLI 175 Microscilla sp....
WP_011584401 135 ---iqRGGR-KKDFWDLHALLNqHTIKGMI--HLHEQRY------LYTHD-------------K-------------SLI 176 Cytophaga hutch...
WP_008237788 134 ---iqRGGR-KKDFWDLHELMAhFSINSML--ELHRLRY------EWTHE-------------R-------------EKI 175 Pedobacter sp. ...
Q138J1       135 ---ilDRAE-AKDYRDIAALLS-SGVSLR---RALGGFS------KMFGR------------DP-------------GLP 175 Rhodopseudomona...
6Y56_A       237 PDSigvltRPVAMAAW------------EARVRKRFAFLTDLDAD 269 Mycobacterium tuberculosis H37Rv
WP_007352454 186 --------------AP------------TKDFVLAAGRvvddery 204 Marinobacter sp. ELB17
WP_237706365 223 ACMk---sMAMTTVSK------------AALWARIKALVR----- 247 Methylibium petroleiphilum
WP_011799804 186 QAIrqdldKALLRLQT------------RQGWLERCMQAMAMVEP 218 Polaromonas naphthalenivorans
Q5QWW7       186 NNGlkralQNLRNNHI--------------AYREEAEGMGIQREY 216 Idiomarina loihiensis
Q0AYA4       170 IRSigyfeDADNEPRPlirraegfslltDLEWNEIKQRFLILQKn 214 Syntrophomonas wolfei subsp. wolfei str. Goettinge...
Q93P81       176 IVNfknfsRADGDFDPvc--------lrGKYWEFIKEDIEEVIQK 212 Microscilla sp. PRE1
WP_011584401 177 QQNivnftKADLDFDPvc--------lkGNYWEFIKEDIEEAAKL 213 Cytophaga hutchinsonii
WP_008237788 176 LKNlidfsIADQDPDPic--------lkEKEWAFIKEDFEAATNP 212 Pedobacter sp. BAL39
Q138J1       176 LRAigffkDGDLASVP------------EGDRQVLRAARDTIVEI 208 Rhodopseudomonas palustris BisB5
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