2D0O


Conserved Protein Domain Family
DDR

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pfam08841: DDR (This model is not part of the current CDD release)
Diol dehydratase reactivase ATPase-like domain
Diol dehydratase (DDH, EC:4.2.1.28) and its isofunctional homologue glycerol dehydratase (GDH, EC.4.2.1.30) are enzymes which catalyze the conversion of glycerol 1,2-propanediol, and 1,2-ethanediol to aldehydes. These reactions require coenzyme B12. Cleavage of the Co-C bond of coenzyme B12 by substrates or coenzyme analogues results in inactivation during which coenzyme B12 remains tightly bound to the apoenzyme. This family comprises of the large subunit of the diol dehydratase and glycerol dehydratase reactivating factors whose function is to reactivate the holoenzyme by exchange of a damaged cofactor for intact coenzyme.
Statistics
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PSSM-Id: 518535
Aligned: 25 rows
Threshold Bit Score: 338.085
Created: 15-Feb-2025
Updated: 25-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2D0O_A        275 VDVAAGAEAIMKAVDGCGRLDNVTGESGTNIGGMLEHVRQTMAELTNK------PSSEIFIQDLLAVDTSVPVSVTGGLA 348 Klebsiella oxy...
WP_006299596  277 VNVEDGAEAIQTTVAASAPVENIFGQPGTHVGGMMERVRRTMSDLTGI------PLGEVSIRDLLAVDTLVPQKVVGGVA 350 Aminomonas pau...
jgi:Tlie_0199 278 VNVESGAEAIMKVLEESQPVKNIFGQPGTNVGGMMERVRRTMSNLTGL------PVADIHIKDLLAVDTLVPQRVVGGIA 351
WP_014738375  277 VDVDAGAEAIMDAVGRAQPLDDARGEPGTHVGGMLAQVRDTMADVMDSpglpavPVAEIAIRDVLAVDTFVPAEVRGGLA 356 Modestobacter ...
WP_281570040  276 IDVSRGAAEIMAEVERVSPLQDVLGESGTNTGGMIANVRQSMADLSKH------ALADVRIKDLLAIDTLVPQEVRGGVA 349 Mycolicibacter...
WP_013405521  276 IGIDAGAEEIMDSLEKIHPIEDVKGQPGTNVGGMLDRVKVTMSKVTDQ------PLEDIRIKDILAVNTFVPKEVKGGLA 349 Halanaerobium ...
1_pfamImport    1 VDLDEGAEKIMQVVSDAGTIYDMEGEHDTNVGNMFSRIKQGMENLDET------AKREIHITDILAVDTMAPVRISGALA 74 
WP_022067854  273 VNIDTGADSIMETLQKAGQIRDISGQQNTNVGNMLDRIKKSMTDVASD------RDQEVRITDILAVDTLAPVEISGSLA 346 Blautia
3_pfamImport    1 VSIDAGGVKIMKSLQKAGDILDIVGQPETNVGNMFHNIRENMAKVSGE------TKEKIRITDLLAVDTMAPVEISGSLA 74 
WP_013275374  273 VDLEEGADKVMQALEQVWPLVDVEGTPSTNVGGLIARVKEVMGQVTYQ------DMRKIKIQDILAVDVLVPQRVTGGIA 346 Thermosedimini...
2D0O_A        349 GEFSLEQAVGIASMVKSDRLQMAMIAREIEQKL------NIDVQIGGAEAEAAILGALTTPGTTRPLAILDLGAGSTDAS 422 Klebsiella oxy...
WP_006299596  351 GEFSLESGVALAVMVKTEELPMQRLAEAVSADL------GVPVEVGGVEADMAIRGALTTPGTKRPLAVLDLGAGSSDAS 424 Aminomonas pau...
jgi:Tlie_0199 352 GEFSQEHGVALAVMVETEKLPMTQLAEAISQET------GVKVMIGGVEAEMAVRGALTTPGTKKPLAILDLGAGSTDAS 425
WP_014738375  357 GEVALENAVALAAMVSTSRSRMQVVADQVSEGL------GAAAAIGGVEGEMAVSGALTTPGVDRPVAVLDLGGGSTDAA 430 Modestobacter ...
WP_281570040  350 GEVALENAVALAAMVRTKESGMQAVADAVATALrdagatRISAVVGGVEAEMAVLGALTTPGTEKPLVVLDMGGGSTDAA 429 Mycolicibacter...
WP_013405521  350 EEYAMENAVGLAAMVKTSQLPMRKIADKLEDET------NVEVEIAGVEANMAILGALTTPGTDKPFVILDMGGGSTDAA 423 Halanaerobium ...
1_pfamImport   75 GETCLEKAVGIAAMVKTRHLPMQKIAEQLRIEL------GVNVMVAGVEAVMASLGALTTPGTSLPLAILDMGGGSTDAA 148
WP_022067854  347 GETCMEKAVGIAAMVKTKHLPMQKIAEKLEQEL------KVKAVVAGVEAVMASLGALTTPGTRLPLAILDMGGGSTDAA 420 Blautia
3_pfamImport   75 GETCMEKAVGIAAMVKTHHLPMEQIAEKLEEEL------HLKGKVAGVEAVMASLGALTTPGTQLPLAILDMGGGSTDAA 148
WP_013275374  347 EEFFTEDAVAVAAMVKSSKLPMEKIAEKVEREL------NIPVEIAGVEANMAVLGALTTPGTDVPVAVLDLGGGSTDAA 420 Thermosedimini...
2D0O_A        423 IINPKGDIIATHLAGAGDMVTMIIARELGLEDRYLAEEIKKYPLAKVESLFHLRHEDGSVQFFSTPLPPAVFARVCVVKA 502 Klebsiella oxy...
WP_006299596  425 FMKEDGTVDLVHLAGAGNMVNTILASELGIEDPDLAESIKRYPLCKAESAFHIRQEDGTVRFFDAPLDPQVFGRVALLHE 504 Aminomonas pau...
jgi:Tlie_0199 426 LMKENGEIDLIHLAGAGNMVNTIIASELGIESMELAESIKRYPLCKVESPFHVRQEDGRVRFFDNPLSPNLFGKNALVVE 505
WP_014738375  431 LLTRDGRATAVHVAGAGELVTKLVHSELALGDREVAESVKRCPLAQVESFFHVRHEDGTVQFFETPLPPEVYARVVVLTP 510 Modestobacter ...
WP_281570040  430 VIERSGDVQAVHLAGAGDLVTKLIDAELGLDNLELAEDIKRLPLGKAESFFHVRLENGTVQFFDKPLPPNAFARVVTLSE 509 Mycolicibacter...
WP_013405521  424 MVTNRDNIYTTHLAGAGDMTSLLINIELGLGDINLAELIKKNPLAKVESVFHVRHEDGSVSFFDEPLAPKLFGRVIILSD 503 Halanaerobium ...
1_pfamImport  149 VISEDGKVSMTHQAGAGELVSMLIETELGLGDRHMAEQIKKYPLAKVESLFHMRMENGQMTFVEQSIDPRFYGRVVLLTE 228
WP_022067854  421 VLEENGTVRTTHQAGAGELVTMLIQTELGLGSRTTAEQIKKYPMGKVESLFHMRLENGSMQFFEESIDPGYYGHVVLLAP 500 Blautia
3_pfamImport  149 LLDADGTVKTTHQAGAGELVSMLIQTELGFKSRATAEQIKKYPLAKVESLFHMRLENGAMEFFQDSIDPRYYGHVVLLAP 228
WP_013275374  421 FMNRKKEVVSIHMAGAGEMVNMIIAAELGLSDRQLAEDIKRYPVAKVESLFSIRMEDGTVRFFEKPLDPQTFARVCLLKE 500 Thermosedimini...
2D0O_A        503 -DELVPLPGDLALEKVRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLVAGR 581 Klebsiella oxy...
WP_006299596  505 nDLLQPIPLPVTLEKVRAARRKAKKEVFVTNALRALEQVAPAGNVRMLDHVVLVGGSASDFEVPTLITEALSRYGIVAGR 584 Aminomonas pau...
jgi:Tlie_0199 506 dDILMPLELDIPVERIREIRRRAKREVFVTNSLRALERVSPAGNVRLLDYVVLVGGSALDFEIPSMITDALSRFGVVAGR 585
WP_014738375  511 -EGPAPVGTRHRLDHVRRVRREAKRRVFVVNALRALRQVAPGGNLRELDFVVLLGGSALDFEIPDMIADALAPHGVVCGT 589 Modestobacter ...
WP_281570040  510 -MGMSPIPTRHSLDRIRTVRRTAKERVFVVNALRALRAVAPHGDLRQIGFVVLLGGCALDFEIPELIADAVAPYGIVCGT 588 Mycolicibacter...
WP_013405521  504 -DDKIPIPTDHSLDKIRQVRRDAKNDVFVRNSIRALKRIIPTGNIRDIDFVVMVGGSAIDFEIPTMISNQLSEYGVVAGR 582 Halanaerobium ...
1_pfamImport  229 -DGMIRLEQDIPMEKIVQVRREAKRKVFVTNAFRALKKVAPGQDLKHISNVVLVGGSAEDFEIPEMLMEELSEFRIVCGR 307
WP_022067854  501 -GEMLKVEEDIPMEKILEVRREAKRKVFVRNAVRALKIVAPEHDLRKISNVVLVGGSAEDFEIPEMLTEALAEYRIVCGR 579 Blautia
3_pfamImport  229 -GELLKIEEDIPMERIRQVRREAKEKVFVTNALRALEKVAPEHNLKNISNVVLVGGSAEDFEIPEMLTQILAEYRIVCGR 307
WP_013275374  501 -GSLVPLPPDLQLEKVRQVRRKAKQKVFVSNAVRALSKVAPSGNLRLIDFVIMVGGSALDFEIPEMISEALAGYGIVAGR 579 Thermosedimini...
2D0O_A        582 GNIRGSEGPRNAVATGLILS 601 Klebsiella oxytoca
WP_006299596  585 GNIRGKEGPRNAVATGLVLS 604 Aminomonas paucivorans
jgi:Tlie_0199 586 GNIRGTEGPRNAVATGLVLG 605
WP_014738375  590 GNVLGTEGPRNAVATGLVRA 609 Modestobacter italicus
WP_281570040  589 GNVRGTEGPRNAVASGLVAS 608 Mycolicibacterium neoaurum
WP_013405521  583 GNIRGVMGPRNAVATGLVLS 602 Halanaerobium hydrogeniformans
1_pfamImport  308 GNIRGEEGPRNAVATGLVLS 327
WP_022067854  580 GNIRGTEGPRNAVATGLLMS 599 Blautia
3_pfamImport  308 GNIRGQEGPRNAVATGLLLS 327
WP_013275374  580 GEIRGSEGPRNAVATGLVLS 599 Thermosediminibacter oceani
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